RNA–Protein interactions for RNA: ENST00000397117.5

SEC13-209, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5 BASIC

Gene SEC13, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-209ENST00000397117 ZNF217O75362 1048 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 SASH3O75995 380 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 ACSL3O95573 720 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 TTC4O95801 387 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 SYPP08247 313 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 MGAT1P26572 445 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 ADRA1AP35348 466 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 RECQLP46063 649 aaPredicted RBP13.31□□□□□ -0.28
SEC13-209ENST00000397117 NPY2RP49146 381 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 CDK18Q07002 472 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 FASTKD3Q14CZ7 662 aaKnown RBP13.31□□□□□ -0.28
SEC13-209ENST00000397117 DLG2Q15700 870 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 EGFLAMQ63HQ2 1017 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 C22orf39Q6P5X5 142 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 SLC25A41Q8N5S1 370 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 PCDH20Q8N6Y1 951 aaKnown RBP13.31□□□□□ -0.28
SEC13-209ENST00000397117 UCMAQ8WVF2 138 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 SORCS1Q8WY21 1168 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 FEM1CQ96JP0 617 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 CAMK1GQ96NX5 476 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 RUFY1Q96T51 708 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 TNKS2Q9H2K2 1166 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 ACBD3Q9H3P7 528 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 VIPAS39Q9H9C1 493 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 NINJ2Q9NZG7 142 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 SAMD15Q9P1V8 674 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 SLCO3A1Q9UIG8 710 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 CHMP2BQ9UQN3 213 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 APC2O95996 2303 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.31□□□□□ -0.28
SEC13-209ENST00000397117 BNIP3LO60238 219 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 SH3BP5O60239 455 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 GSRP00390 522 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 EPOP01588 193 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 NDUFV2P19404 249 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 PHBP35232 272 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 CSNK1DP48730 415 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 RAD51Q06609 339 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 CBLBQ13191 982 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 TRIP6Q15654 476 aaKnown RBP13.31□□□□□ -0.28
SEC13-209ENST00000397117 UAP1Q16222 522 aaPredicted RBP13.31□□□□□ -0.28
SEC13-209ENST00000397117 ALS2CLQ60I27 953 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 NCEH1Q6PIU2 408 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 RANBP10Q6VN20 620 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 PAF1Q8N7H5 531 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 OR2AP1Q8NGE2 309 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 ADAMTS14Q8WXS8 1223 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 STAMBPL1Q96FJ0 436 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 CFAP36Q96G28 342 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 HSPA12BQ96MM6 686 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 GABRG3Q99928 467 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 IL22Q9GZX6 179 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 VPS37BQ9H9H4 285 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 ZC3H7BQ9UGR2 993 aaKnown RBP13.31□□□□□ -0.28
SEC13-209ENST00000397117 CYP8B1Q9UNU6 501 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 GPSM3Q9Y4H4 160 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 RAI2Q9Y5P3 530 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 TEX264Q9Y6I9 313 aa13.31□□□□□ -0.28
SEC13-209ENST00000397117 CABIN1Q9Y6J0 2220 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 LOC285095A0A1B0GVY8 99 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 PRRT4C9JH25 899 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 ATP9BO43861 1147 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 TPH1P17752 444 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 HLA-DPA1P20036 260 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 VASPP50552 380 aaPredicted RBP13.3□□□□□ -0.28
SEC13-209ENST00000397117 CRADDP78560 199 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 IFFO1Q0D2I5 559 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 SLC29A2Q14542 456 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 SLC1A5Q15758 541 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 FNDC3BQ53EP0 1204 aaKnown RBP13.3□□□□□ -0.28
SEC13-209ENST00000397117 CARD16Q5EG05 197 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 CAPN12Q6ZSI9 719 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 CCNJLQ8IV13 435 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 MPP5Q8N3R9 675 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 OR6K2Q8NGY2 324 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 PDCD6IPQ8WUM4 868 aaKnown RBP13.3□□□□□ -0.28
SEC13-209ENST00000397117 MRGPRX3Q96LB0 322 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 SIGLEC10Q96LC7 697 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 EBNA1BP2Q99848 306 aaKnown RBP13.3□□□□□ -0.28
SEC13-209ENST00000397117 NAT9Q9BTE0 207 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 ADGRE3Q9BY15 652 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 ATP13A3Q9H7F0 1226 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 LRRC4CQ9HCJ2 640 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 SYBUQ9NX95 663 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 FAM53CQ9NYF3 392 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 PLAAQ9Y263 795 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 PCDHGC4Q9Y5F7 938 aa13.3□□□□□ -0.28
SEC13-209ENST00000397117 MAGEB16A2A368 324 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 ZNF821O75541 412 aaPredicted RBP13.29□□□□□ -0.28
SEC13-209ENST00000397117 NDST3O95803 873 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 FGF1P05230 155 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 TSHRP16473 764 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 BCL2L1Q07817 233 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 IHHQ14623 411 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 E2F5Q15329 346 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 PTPRNQ16849 979 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 MYLK3Q32MK0 819 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 SIRPB2Q5JXA9 342 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 CERCAMQ5T4B2 595 aa13.29□□□□□ -0.28
SEC13-209ENST00000397117 DENND5AQ6IQ26 1287 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms