RNA–Protein interactions for RNA: ENST00000397099.1

SEC13-204, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 4

Gene SEC13, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-204ENST00000397099 SRP54P61011 504 aaKnown RBP13.96□□□□□ -0.17
SEC13-204ENST00000397099 NR0B2Q15466 257 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 CNGA3Q16281 694 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 TAZQ16635 292 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 ZNF542PQ5EBM4 170 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 C6orf132Q5T0Z8 1188 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 PNCKQ6P2M8 343 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 ENPP7Q6UWV6 458 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 ZNF765Q7L2R6 523 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 RFX6Q8HWS3 928 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 KATNAL2Q8IYT4 538 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 RCOR2Q8IZ40 523 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 OR56A4Q8NGH8 313 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 UBE2Q2Q8WVN8 375 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 PIH1D2Q8WWB5 315 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 NXPE2Q96DL1 559 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 DTD2Q96FN9 168 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 RBM41Q96IZ5 413 aaKnown RBP13.96□□□□□ -0.17
SEC13-204ENST00000397099 LYSMD1Q96S90 227 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 FERMT1Q9BQL6 677 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 BOCQ9BWV1 1114 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 TDRD1Q9BXT4 1180 aaKnown RBP13.96□□□□□ -0.17
SEC13-204ENST00000397099 RBSNQ9H1K0 784 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 PHPT1Q9NRX4 125 aaPredicted RBP13.96□□□□□ -0.17
SEC13-204ENST00000397099 KLF15Q9UIH9 416 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 TTLL3Q9Y4R7 772 aa13.96□□□□□ -0.17
SEC13-204ENST00000397099 NBEAQ8NFP9 2946 aa13.96□□□□□ -0.18
SEC13-204ENST00000397099 LAMA5O15230 3695 aa13.96□□□□□ -0.18
SEC13-204ENST00000397099 A0A0J9YYE9 177 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 RGSL1A5PLK6 1076 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 JCHAINP01591 159 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 TRBC1P01850 177 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 PRKCGP05129 697 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 MYCLP1P12525 358 aaPredicted RBP13.95□□□□□ -0.18
SEC13-204ENST00000397099 TGM2P21980 687 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 CETN2P41208 172 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 COPS2P61201 443 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 AP1B1Q10567 949 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 SLC10A2Q12908 348 aaPredicted RBP13.95□□□□□ -0.18
SEC13-204ENST00000397099 HES3Q5TGS1 186 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 DAAM2Q86T65 1068 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 CPNE8Q86YQ8 564 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 HID1Q8IV36 788 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 NRSN1Q8IZ57 195 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 EXD1Q8NHP7 514 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 OLFM3Q96PB7 478 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 RBM15Q96T37 977 aaKnown RBP eCLIP13.95□□□□□ -0.188e-6■■□□□ 12.8
SEC13-204ENST00000397099 LRRC61Q9BV99 259 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 NRSN2Q9GZP1 204 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 ABCG4Q9H172 646 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 PCDH9Q9HC56 1237 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 CLCA2Q9UQC9 943 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 EFR3BQ9Y2G0 817 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 OR1A2Q9Y585 309 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 ITPR1Q14643 2758 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 LRP4O75096 1905 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 ACACAQ13085 2346 aa13.95□□□□□ -0.18
SEC13-204ENST00000397099 TTC24A2A3L6 582 aaPredicted RBP13.94□□□□□ -0.18
SEC13-204ENST00000397099 EME2A4GXA9 379 aaPredicted RBP13.94□□□□□ -0.18
SEC13-204ENST00000397099 CAPN8A6NHC0 703 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 NPIPB15A6NHN6 443 aaPredicted RBP13.94□□□□□ -0.18
SEC13-204ENST00000397099 YY2O15391 372 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 HLA-DQB2P05538 268 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 CDC25BP30305 580 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 CDKN2BP42772 138 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 CAMK2BQ13554 666 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 ALG11Q2TAA5 492 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 TPRG1LQ5T0D9 272 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 DCBLD1Q8N8Z6 715 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 ARRDC2Q8TBH0 407 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 CCHCR1Q8TD31 782 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 HNRNPLLQ8WVV9 542 aaKnown RBP13.94□□□□□ -0.18
SEC13-204ENST00000397099 P3H4Q92791 437 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 FUBP1Q96AE4 644 aaKnown RBP13.94□□□□□ -0.18
SEC13-204ENST00000397099 RNF25Q96BH1 459 aaPredicted RBP13.94□□□□□ -0.18
SEC13-204ENST00000397099 NSMCE3Q96MG7 304 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 VAT1Q99536 393 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 LGMNQ99538 433 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 TEX101Q9BY14 249 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 CDH19Q9H159 772 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 SLC25A51Q9H1U9 297 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 GPSM3Q9Y4H4 160 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 MYLKQ15746 1914 aa13.94□□□□□ -0.18
SEC13-204ENST00000397099 CCDC66A2RUB6 948 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 HACD1B0YJ81 288 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 KCNK1O00180 336 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 GCATO75600 419 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 TCEA3O75764 348 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 MAP3K6O95382 1288 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 TNNT3P45378 269 aaPredicted RBP13.93□□□□□ -0.18
SEC13-204ENST00000397099 INSM1Q01101 510 aaPredicted RBP13.93□□□□□ -0.18
SEC13-204ENST00000397099 DSC2Q02487 901 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 TARDBPQ13148 414 aaKnown RBP eCLIP13.93□□□□□ -0.181e-7■■□□□ 14.1
SEC13-204ENST00000397099 PPP2R5EQ16537 467 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 DEFB133Q30KQ1 61 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 TEX44Q53QW1 395 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 CCDC70Q6NSX1 233 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 MFSD7Q6UXD7 560 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 SPOCD1Q6ZMY3 1216 aa13.93□□□□□ -0.18
SEC13-204ENST00000397099 NT5DC3Q86UY8 548 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms