RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 LINC00469Q8N7U9 141 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 KCTD6Q8NC69 237 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 FBXL13Q8NEE6 735 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 ZBED3Q96IU2 234 aaPredicted RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 TRNT1Q96Q11 434 aaKnown RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 TOPORSQ9NS56 1045 aaPredicted RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 SCN3BQ9NY72 215 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 DNAJB4Q9UDY4 337 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 PCYOX1Q9UHG3 505 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 DNPEPQ9ULA0 475 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 GRID1Q9ULK0 1009 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 PAPPA2Q9BXP8 1791 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 PRR23D1E9PI22 279 aaPredicted RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 HNRNPDLO14979 420 aaKnown RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 PRR23D2P0DMB1 279 aaPredicted RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 CAP2P40123 477 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 BOLA3Q53S33 107 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 DNAJB7Q7Z6W7 309 aaPredicted RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 CBWD2Q8IUF1 395 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 CLYBLQ8N0X4 340 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 DNAAF3Q8N9W5 541 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 RAB2BQ8WUD1 216 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 ZNF668Q96K58 619 aaPredicted RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 TMEM109Q9BVC6 243 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 ZNF696Q9H7X3 374 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 RMND5AQ9H871 391 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 ARMC1Q9NVT9 282 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 HCN4Q9Y3Q4 1203 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 MUTP22033 750 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 FMO1Q01740 532 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 RPL6Q02878 288 aaKnown RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 CDK18Q07002 472 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 CDO1Q16878 200 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 SYT16Q17RD7 645 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 PLEKHG6Q3KR16 790 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 CDONQ4KMG0 1287 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 PLA2G4FQ68DD2 849 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 ANKRD26P1Q6NSI1 321 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 RHOT1Q8IXI2 618 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 PHTF2Q8N3S3 785 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 LPGAT1Q92604 370 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 TCF12Q99081 682 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 FEM1AQ9BSK4 669 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 TSEN34Q9BSV6 310 aaKnown RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 C1QTNF1Q9BXJ1 281 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 ABCB9Q9NP78 766 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 SPATA6Q9NWH7 488 aaPredicted RBP8.44□□□□□ -1.06
NDE1-202ENST00000396355 CDY2AQ9Y6F7 541 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 CDY1Q9Y6F8 540 aa8.44□□□□□ -1.06
NDE1-202ENST00000396355 COL11A1P12107 1806 aaPredicted RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 A0A0C4DFX4 3053 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 CHURC1-FNTBB4DL54 471 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 H3BNH8 94 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 RNF103O00237 685 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 ANGPT2O15123 496 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 SLC16A4O15374 487 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 SNAP91O60641 907 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 CSDE1O75534 798 aaKnown RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 OR2B3O76000 313 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 RSL1D1O76021 490 aaKnown RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 IGFBP4P22692 258 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 KELP23276 732 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 ACADSBP45954 432 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 GTF2H3Q13889 308 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 PYHIN1Q6K0P9 492 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 P3H2Q8IVL5 708 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 DHX38Q92620 1227 aaKnown RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 ALPK1Q96QP1 1244 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 RIT2Q99578 217 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 HERPUD2Q9BSE4 406 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 IFT80Q9P2H3 777 aaPredicted RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 CDYLQ9Y232 598 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 AP3M1Q9Y2T2 418 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 TRAF6Q9Y4K3 522 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 CNTNAP2Q9UHC6 1331 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 SGCEO43556 437 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 FADS2O95864 444 aaKnown RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 KLF10Q13118 480 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 TKFCQ3LXA3 575 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 SLC39A4Q6P5W5 647 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 LYPD8Q6UX82 237 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 FAM71AQ8IYT1 594 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 TMEM174Q8WUU8 243 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 ZBTB18Q99592 522 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 SEC22CQ9BRL7 303 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 TNKS2Q9H2K2 1166 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 RAVER2Q9HCJ3 691 aaKnown RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 AGO4Q9HCK5 861 aaKnown RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 NCOR1O75376 2440 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 KPNA7A9QM74 516 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 C9JVG2 144 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 MSI1O43347 362 aaKnown RBP8.43□□□□□ -1.06
NDE1-202ENST00000396355 HS6ST1O60243 411 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 CCNE2O96020 404 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 APOC3P02656 99 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 GNAO1P09471 354 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 GTF2BQ00403 316 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 PRKCEQ02156 737 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 GALEQ14376 348 aa8.43□□□□□ -1.06
NDE1-202ENST00000396355 ATP13A4Q4VNC1 1196 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms