RNA–Protein interactions for RNA: ENST00000396263.6

CCHCR1-202, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 5 BASIC

Gene CCHCR1, Length 2,490 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-202ENST00000396263 SCN4BQ8IWT1 228 aa16.02■□□□□ 0.15
CCHCR1-202ENST00000396263 AHI1Q8N157 1196 aa16.02■□□□□ 0.15
CCHCR1-202ENST00000396263 PCDH20Q8N6Y1 951 aaKnown RBP16.02■□□□□ 0.15
CCHCR1-202ENST00000396263 ZNF296Q8WUU4 475 aaPredicted RBP16.02■□□□□ 0.15
CCHCR1-202ENST00000396263 PLK2Q9NYY3 685 aa16.02■□□□□ 0.15
CCHCR1-202ENST00000396263 GPC4O75487 556 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 SNRPB2P08579 225 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 CST5P28325 142 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 THPOP40225 353 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 ATXN3P54252 364 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 CDKN2DP55273 166 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 DSC2Q02487 901 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 MS4A13Q5J8X5 152 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 ZNF678Q5SXM1 525 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 HACD2Q6Y1H2 254 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 ISCA2Q86U28 154 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 ABTB1Q969K4 478 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 HDAC10Q969S8 669 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 KLHL5Q96PQ7 755 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 ADAM2Q99965 735 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 SLC25A23Q9BV35 468 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 ZNF696Q9H7X3 374 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 CCDC167Q9P0B6 97 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 IGLV3-10A0A075B6K4 115 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 UBFD1O14562 309 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 VILLO15195 856 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 OR4Q2P0C623 313 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 ARSAP15289 507 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 ARSDP51689 593 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 SH3BGRP55822 239 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 TBX4P57082 545 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 RHDQ02161 417 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 SLC39A12Q504Y0 691 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 SIRPB2Q5JXA9 342 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 IL23RQ5VWK5 629 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 FAM45BPQ6NSW5 357 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 C8orf82Q6P1X6 216 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 PAOXQ6QHF9 649 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 CYHR1Q6ZMK1 362 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 LARP4Q71RC2 724 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 OR6P1Q8NGX9 317 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 FAM45AQ8TCE6 357 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 PABPC5Q96DU9 382 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 DUS3LQ96G46 650 aaKnown RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 PRICKLE1Q96MT3 831 aaPredicted RBP16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 SP110Q9HB58 689 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 SPAG4Q9NPE6 437 aa16.01■□□□□ 0.15
CCHCR1-202ENST00000396263 LOC285095A0A1B0GVY8 99 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 H0YJX3 145 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 INPPL1O15357 1258 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 TNFAIP8O95379 198 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 ATXN1LP0C7T5 689 aaKnown RBP16■□□□□ 0.15
CCHCR1-202ENST00000396263 RPL5P46777 297 aaKnown RBP16■□□□□ 0.15
CCHCR1-202ENST00000396263 ACADVLP49748 655 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 PRAMEP78395 509 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 PLOD1Q02809 727 aaPredicted RBP16■□□□□ 0.15
CCHCR1-202ENST00000396263 CREB5Q02930 508 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 LPIN1Q14693 890 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 ALFQ53S48 1182 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 GPR158Q5T848 1215 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 HOMEZQ8IX15 550 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 NUP93Q8N1F7 819 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 RIN3Q8TB24 985 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 ARRDC2Q8TBH0 407 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 PXYLP1Q8TE99 480 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 ATP6V1E2Q96A05 226 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 ALG9Q9H6U8 611 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 DDX18Q9NVP1 670 aaKnown RBP16■□□□□ 0.15
CCHCR1-202ENST00000396263 ABI2Q9NYB9 513 aaPredicted RBP16■□□□□ 0.15
CCHCR1-202ENST00000396263 PTTG2Q9NZH5 202 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 CD300AQ9UGN4 299 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 MAGEB3O15480 346 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 LDB2O43679 373 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 CNTN5O94779 1100 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 INHAP05111 366 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 KCNC1P48547 511 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 ACVR1Q04771 509 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 USP41Q3LFD5 358 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 ISLR2Q6UXK2 745 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 PNPLA1Q8N8W4 532 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 SNRNP27Q8WVK2 155 aaKnown RBP16■□□□□ 0.15
CCHCR1-202ENST00000396263 PEX13Q92968 403 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 PSMG2Q969U7 264 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 FBXO44Q9H4M3 255 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 TMEM181Q9P2C4 612 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 MARCH4Q9P2E8 410 aaPredicted RBP16■□□□□ 0.15
CCHCR1-202ENST00000396263 UXTQ9UBK9 157 aaPredicted RBP16■□□□□ 0.15
CCHCR1-202ENST00000396263 AP4S1Q9Y587 144 aa16■□□□□ 0.15
CCHCR1-202ENST00000396263 PRORSD1PA6NEY8 169 aa15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 NRP2O60462 931 aa15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 FKTNO75072 461 aa15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 TFAP2AP05549 437 aa15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 ZNF26P17031 533 aaPredicted RBP15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 FDXRP22570 491 aa15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 CDKL1Q00532 357 aa15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 MYBPC1Q00872 1141 aa15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 UNC50Q53HI1 259 aa15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 LDB1Q86U70 411 aaPredicted RBP15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 ZNF598Q86UK7 904 aaKnown RBP15.99■□□□□ 0.15
CCHCR1-202ENST00000396263 LZICQ8WZA0 190 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms