RNA–Protein interactions for RNA: ENST00000396096.6

NUP50-202, Transcript of nucleoporin 50, humanhuman

TSL 1 (best) BASIC

Gene NUP50, Length 1,895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-202ENST00000396096 RHEBL1Q8TAI7 183 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 IGSF21Q96ID5 467 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 SERPINI1Q99574 410 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 CLSTN3Q9BQT9 956 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 KLF16Q9BXK1 252 aaPredicted RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 ALG9Q9H6U8 611 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 GPBP1L1Q9HC44 474 aaPredicted RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 TRPM5Q9NZQ8 1165 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 STK39Q9UEW8 545 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 SPO11Q9Y5K1 396 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 ACTL7AQ9Y615 435 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 ANAPC1Q9H1A4 1944 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 COL4A6Q14031 1691 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 AIM2O14862 343 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 SORBS2O94875 1100 aaKnown RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 F11P03951 625 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 ZNF37AP17032 561 aaPredicted RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 KCNC1P48547 511 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 DSG1Q02413 1049 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 ZNF177Q13360 481 aaPredicted RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 CYTH1Q15438 398 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 ADGRF1Q5T601 910 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 TPGS2Q68CL5 300 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 IRGCQ6NXR0 463 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 SPNS2Q8IVW8 549 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 KBTBD2Q8IY47 623 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 PGAM4Q8N0Y7 254 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 ZNF461Q8TAF7 563 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 SH3RF2Q8TEC5 729 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 PTERQ96BW5 349 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 SCLYQ96I15 445 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 TCF12Q99081 682 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 TTC1Q99614 292 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 SPON2Q9BUD6 331 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 TDRD1Q9BXT4 1180 aaKnown RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 POLR3BQ9NW08 1133 aaPredicted RBP16.8■□□□□ 0.28
NUP50-202ENST00000396096 STOML2Q9UJZ1 356 aa16.8■□□□□ 0.28
NUP50-202ENST00000396096 BUD23O43709 281 aaKnown RBP16.79■□□□□ 0.28
NUP50-202ENST00000396096 FKTNO75072 461 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 SMIM24O75264 130 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 PRLP01236 227 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 SGSHP51688 502 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 UNC50Q53HI1 259 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 AFTPHQ6ULP2 937 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 ZNF783Q6ZMS7 281 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 DHDDSQ86SQ9 333 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 RCN3Q96D15 328 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 PHF21BQ96EK2 531 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 ASB2Q96Q27 587 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 DDX50Q9BQ39 737 aaKnown RBP16.79■□□□□ 0.28
NUP50-202ENST00000396096 TFB2MQ9H5Q4 396 aaKnown RBP16.79■□□□□ 0.28
NUP50-202ENST00000396096 EFCAB1Q9HAE3 211 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 TNFRSF12AQ9NP84 129 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 SCUBE2Q9NQ36 999 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 AGO1Q9UL18 857 aaKnown RBP16.79■□□□□ 0.28
NUP50-202ENST00000396096 G3BP2Q9UN86 482 aaKnown RBP16.79■□□□□ 0.28
NUP50-202ENST00000396096 PLXNA4Q9HCM2 1894 aa16.79■□□□□ 0.28
NUP50-202ENST00000396096 BPTFQ12830 3046 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 SLC4A1P02730 911 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 PIRTP0C851 137 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 PPP3CCP48454 512 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 PLK1P53350 603 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 HERVK_113P63132 956 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 MRPS35P82673 323 aaKnown RBP16.78■□□□□ 0.28
NUP50-202ENST00000396096 BNC2Q6ZN30 1099 aaPredicted RBP16.78■□□□□ 0.28
NUP50-202ENST00000396096 KBTBD6Q86V97 674 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 CCDC124Q96CT7 223 aaKnown RBP16.78■□□□□ 0.28
NUP50-202ENST00000396096 ERVK-6Q9BXR3 956 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 TRAF6Q9Y4K3 522 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 CEP350Q5VT06 3117 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 UBFD1O14562 309 aaKnown RBP16.78■□□□□ 0.28
NUP50-202ENST00000396096 PQBP1O60828 265 aaKnown RBP16.78■□□□□ 0.28
NUP50-202ENST00000396096 SMNDC1O75940 238 aaKnown RBP eCLIP16.78■□□□□ 0.28
NUP50-202ENST00000396096 BAG2O95816 211 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 LATS1O95835 1130 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 CDC25CP30307 473 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 SCNN1BP51168 640 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 C1QTNF8P60827 252 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 KLC1Q07866 573 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 SQLEQ14534 574 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 PIGGQ5H8A4 983 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 TCHHL1Q5QJ38 904 aaPredicted RBP16.78■□□□□ 0.28
NUP50-202ENST00000396096 CXorf57Q6NSI4 855 aaKnown RBP16.78■□□□□ 0.28
NUP50-202ENST00000396096 MDGA1Q8NFP4 955 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 SLC26A7Q8TE54 656 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 PYDC1Q8WXC3 89 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 LPGAT1Q92604 370 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 PPP1R12CQ9BZL4 782 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 HIPK3Q9H422 1215 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 GKN1Q9NS71 199 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 UTP6Q9NYH9 597 aaKnown RBP16.78■□□□□ 0.28
NUP50-202ENST00000396096 MTF2Q9Y483 593 aaPredicted RBP16.78■□□□□ 0.28
NUP50-202ENST00000396096 YIPF1Q9Y548 306 aa16.78■□□□□ 0.28
NUP50-202ENST00000396096 SKAP2O75563 359 aaPredicted RBP16.77■□□□□ 0.27
NUP50-202ENST00000396096 SOD2P04179 222 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 PMLP29590 882 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 PTK2BQ14289 1009 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 ZNF423Q2M1K9 1284 aa16.77■□□□□ 0.27
NUP50-202ENST00000396096 KIAA1841Q6NSI8 718 aa16.77■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms