RNA–Protein interactions for RNA: ENST00000395354.1

LMNB1-202, Transcript of lamin B1, humanhuman

TSL 1 (best) BASIC

Gene LMNB1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-202ENST00000395354 SPATA21Q7Z572 469 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 SFTPA1Q8IWL2 248 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 OR13J1Q8NGT2 312 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 SHDQ96IW2 340 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 CIPCQ9C0C6 399 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 C12orf65Q9H3J6 166 aaKnown RBP19.34■□□□□ 0.69
LMNB1-202ENST00000395354 MFSD1Q9H3U5 465 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 ELOVL2Q9NXB9 296 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.34■□□□□ 0.69
LMNB1-202ENST00000395354 PHTF1Q9UMS5 762 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 KIAA1549LQ6ZVL6 1849 aa19.34■□□□□ 0.69
LMNB1-202ENST00000395354 KRBA1A5PL33 1030 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 CRTAMO95727 393 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 AHSGP02765 367 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 CSNK1DP48730 415 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 CSRP3P50461 194 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 SULT2A1Q06520 285 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 ZKSCAN8Q15776 578 aaPredicted RBP19.33■□□□□ 0.69
LMNB1-202ENST00000395354 SMAD1Q15797 465 aaKnown RBP19.33■□□□□ 0.69
LMNB1-202ENST00000395354 SIX5Q8N196 739 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 ADGRE3Q9BY15 652 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 FBXO5Q9UKT4 447 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 ANKRD6Q9Y2G4 727 aa19.33■□□□□ 0.69
LMNB1-202ENST00000395354 MYLKQ15746 1914 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 GOLGA8TH3BQL2 631 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 ATP5BP06576 529 aaKnown RBP19.32■□□□□ 0.68
LMNB1-202ENST00000395354 DRD1P21728 446 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 PSMA3P25788 255 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 TNFRSF4P43489 277 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 RHOAP61586 193 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 AP1S1P61966 158 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 EIF4HQ15056 248 aaKnown RBP19.32■□□□□ 0.68
LMNB1-202ENST00000395354 LINGO4Q6UY18 593 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 STYXQ8WUJ0 223 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 SORCS1Q8WY21 1168 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 SIRPGQ9P1W8 387 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 GGT7Q9UJ14 662 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 RAI2Q9Y5P3 530 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 K7EQS6 105 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 PRLP01236 227 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 GABRB3P28472 473 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 SLC1A2P43004 574 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 CTSOP43234 321 aaPredicted RBP19.32■□□□□ 0.68
LMNB1-202ENST00000395354 MAPK8P45983 427 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 CD151P48509 253 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 STARD6P59095 220 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 ECT2LQ008S8 904 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 GALNT3Q14435 633 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 GRM3Q14832 879 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 CCDC153Q494R4 210 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 ZNF470Q6ECI4 717 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 FAM47EQ6ZV65 393 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 ARMC2Q8NEN0 867 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 UCMAQ8WVF2 138 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 EZH1Q92800 747 aaPredicted RBP19.32■□□□□ 0.68
LMNB1-202ENST00000395354 NSMCE3Q96MG7 304 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 NDRG2Q9UN36 371 aaKnown RBP19.32■□□□□ 0.68
LMNB1-202ENST00000395354 PLA2G4CQ9UP65 541 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 CHKBQ9Y259 395 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 ARL2BPQ9Y2Y0 163 aa19.32■□□□□ 0.68
LMNB1-202ENST00000395354 A0A096LPK6 155 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 WDR91A4D1P6 747 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 PLIN3O60664 434 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 KIAA0754O94854 1291 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 EGFP01133 1207 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 ASLP04424 464 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 BPGMP07738 259 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 DLDP09622 509 aaKnown RBP19.31■□□□□ 0.68
LMNB1-202ENST00000395354 NEFHP12036 1026 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 COL6A2P12110 1019 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 LEPRP48357 1165 aaKnown RBP19.31■□□□□ 0.68
LMNB1-202ENST00000395354 PRAMEP78395 509 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 CTBP1Q13363 440 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 TAF1AQ15573 450 aaPredicted RBP19.31■□□□□ 0.68
LMNB1-202ENST00000395354 N4BP2L1Q5TBK1 243 aaPredicted RBP19.31■□□□□ 0.68
LMNB1-202ENST00000395354 ATG16L1Q676U5 607 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 CGB2Q6NT52 195 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 CLEC14AQ86T13 490 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 SRLQ86TD4 932 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 DENND6AQ8IWF6 608 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 GPR150Q8NGU9 434 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 BLOC1S5Q8TDH9 187 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 CYB5D2Q8WUJ1 264 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 SCG3Q8WXD2 468 aaKnown RBP19.31■□□□□ 0.68
LMNB1-202ENST00000395354 EXOC2Q96KP1 924 aa19.31■□□□□ 0.68
LMNB1-202ENST00000395354 MRPS17Q9Y2R5 130 aaKnown RBP19.31■□□□□ 0.68
LMNB1-202ENST00000395354 VCANP13611 3396 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.3■□□□□ 0.68
LMNB1-202ENST00000395354 RPP40O75818 363 aaKnown RBP19.3■□□□□ 0.68
LMNB1-202ENST00000395354 MT-CO1P00395 513 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 C2P06681 752 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 MPP1Q00013 466 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 IFT88Q13099 833 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 USP10Q14694 798 aaKnown RBP19.3■□□□□ 0.68
LMNB1-202ENST00000395354 CMC1Q7Z7K0 106 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 NUDCD3Q8IVD9 361 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 EDAQ92838 391 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 HDAC10Q969S8 669 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 RMDN1Q96DB5 314 aa19.3■□□□□ 0.68
LMNB1-202ENST00000395354 ATXN7L3BQ96GX2 97 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms