RNA–Protein interactions for RNA: ENST00000394803.9

UBE2D3-208, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 2,227 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-208ENST00000394803 NRBF2Q96F24 287 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 MYRFLQ96LU7 910 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 SLC29A1Q99808 456 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 SIK2Q9H0K1 926 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 ATP13A1Q9HD20 1204 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 INTS10Q9NVR2 710 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 DNAAF2Q9NVR5 837 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 DUS2Q9NX74 493 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 SLC2A6Q9UGQ3 507 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 AURKCQ9UQB9 309 aa10.06□□□□□ -0.8
UBE2D3-208ENST00000394803 TANC1Q9C0D5 1861 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 NEMP2A6NFY4 417 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 NR5A2O00482 541 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 PAGE1O75459 146 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 CHEK2O96017 543 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 PCSK6P29122 969 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 CPT1AP50416 773 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 TNK2Q07912 1038 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SFSWAPQ12872 951 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SPIDRQ14159 915 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 ATP6AP1Q15904 470 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SLC36A3Q495N2 470 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 RBM20Q5T481 1227 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 KIAA0319Q5VV43 1072 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 KANK2Q63ZY3 851 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 KDELC1Q6UW63 502 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 PATL1Q86TB9 770 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 GPR180Q86V85 440 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 PROSER1Q86XN7 944 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 HOMEZQ8IX15 550 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 CBR4Q8N4T8 237 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 DHRSXQ8N5I4 330 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 BORCS5Q969J3 196 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 MYLPFQ96A32 169 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 ISOC1Q96CN7 298 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 IMP4Q96G21 291 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 VPS50Q96JG6 964 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 C1orf74Q96LT6 269 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 OLFM1Q99784 485 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 NUSAP1Q9BXS6 441 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 TFB2MQ9H5Q4 396 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SYTL2Q9HCH5 934 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 PALMDQ9NP74 551 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 RGS18Q9NS28 235 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 OSER1Q9NX31 292 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 MYOCOSA0A1B0GUC4 107 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SYCE1LA8MT33 242 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 H0YAE9 185 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SOCS2O14508 198 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 GIPC1O14908 333 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 CLOCKO15516 846 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 CRCPO75575 148 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 RPLP2P05387 115 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 ATP6V1B2P21281 511 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 CAPGP40121 348 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 PSEN2P49810 448 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 CCT8P50990 548 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 EMP3P54852 163 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 EEFSECP57772 596 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 KCNK10P57789 538 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 GRB14Q14449 540 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 PPP1R3AQ16821 1122 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 OGFOD2Q6N063 350 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 LAYNQ6UX15 382 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SPRED1Q7Z699 444 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 PTRH1Q86Y79 214 aaKnown RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 THEM5Q8N1Q8 247 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 PDPRQ8NCN5 879 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 TWIST2Q8WVJ9 160 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 THAP11Q96EK4 314 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 CDCA5Q96FF9 252 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SERPINB11Q96P15 392 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 ALG9Q9H6U8 611 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 AKTIPQ9H8T0 292 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SDR39U1Q9NRG7 319 aaPredicted RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SMPD3Q9NY59 655 aaPredicted RBP10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 RIMKLBQ9ULI2 386 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 NEU3Q9UQ49 428 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 GIT1Q9Y2X7 761 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 SNX10Q9Y5X0 201 aa10.05□□□□□ -0.8
UBE2D3-208ENST00000394803 MIA3Q5JRA6 1907 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 TTC24A2A3L6 582 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 C17orf102A2RUQ5 167 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 SAC3D1A6NKF1 404 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 NME4O00746 187 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 WISP3O95389 354 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 GLP2RO95838 553 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 ZNF12P17014 697 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 OGNP20774 298 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 FDXRP22570 491 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 ADAM17P78536 824 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 TSPY1Q01534 308 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 MTA1Q13330 715 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 EIF4EBP2Q13542 120 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 BTG3Q14201 252 aaPredicted RBP10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 UNC50Q53HI1 259 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 MARC1Q5VT66 337 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 TAF2Q6P1X5 1199 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 FAM171BQ6P995 826 aa10.04□□□□□ -0.8
UBE2D3-208ENST00000394803 ARHGAP36Q6ZRI8 547 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms