RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 NDST2P52849 883 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 SAMD4BQ5PRF9 694 aaKnown RBP10.87□□□□□ -0.67
BRF1-204ENST00000392557 RBM20Q5T481 1227 aaKnown RBP10.87□□□□□ -0.67
BRF1-204ENST00000392557 MFSD4BQ5TF39 518 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 AGAP9Q5VTM2 703 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 GPR107Q5VW38 600 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 OR52K2Q8NGK3 314 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 RDH11Q8TC12 318 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 STYXQ8WUJ0 223 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 NTAN1Q96AB6 310 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 RPL10LQ96L21 214 aaKnown RBP10.87□□□□□ -0.67
BRF1-204ENST00000392557 SLC9A7Q96T83 725 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 SEPHS2Q99611 448 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 UNC93B1Q9H1C4 597 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 CLK4Q9HAZ1 481 aaKnown RBP10.87□□□□□ -0.67
BRF1-204ENST00000392557 NDFIP2Q9NV92 336 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 CACNA2D2Q9NY47 1150 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 FBXO5Q9UKT4 447 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 TRHDEQ9UKU6 1024 aa10.87□□□□□ -0.67
BRF1-204ENST00000392557 TDRD15B5MCY1 1934 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 PLOD2O00469 737 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 NRP2O60462 931 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 TPP2P29144 1249 aaPredicted RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 ENTPD1P49961 510 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PLCL1Q15111 1095 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 VPS26BQ4G0F5 336 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PCID2Q5JVF3 399 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 OTUD3Q5T2D3 398 aaPredicted RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 NEPROQ6NW34 567 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 CHST15Q7LFX5 561 aaPredicted RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 LSMEM2Q8N112 164 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 KDM1BQ8NB78 822 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PCYOX1LQ8NBM8 494 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 LINC01599Q8WXQ3 324 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 TUBGCP3Q96CW5 907 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PABPC5Q96DU9 382 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 TMEM165Q9HC07 324 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 ABCC13Q9NSE7 274 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PRSS51A0A1B0GVH4 220 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 ERI2A8K979 691 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 M0QZQ0 153 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 NCAM2O15394 837 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PENKP01210 267 aaPredicted RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 HADHAP40939 763 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 C1QTNF8P60827 252 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 RHDQ02161 417 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 VARS2Q5ST30 1063 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 PKN3Q6P5Z2 889 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 CLEC14AQ86T13 490 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 GAB3Q8WWW8 586 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 MRPL57Q9BQC6 102 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 SLC25A23Q9BV35 468 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 CSNK1G1Q9HCP0 422 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 HMX1Q9NP08 348 aaPredicted RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 CREBZFQ9NS37 354 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 HSFX1Q9UBD0 423 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 CNOT6Q9ULM6 557 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 AAR2Q9Y312 384 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 VCANP13611 3396 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 IRAK2O43187 625 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 BAIAP3O94812 1187 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 GNAO1P09471 354 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 GFAPP14136 432 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PSMA4P25789 261 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 GABRB3P28472 473 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PSMD7P51665 324 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 CCL23P55773 120 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 MAXP61244 160 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 ATP1A4Q13733 1029 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 INPP5AQ14642 412 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 TRIM71Q2Q1W2 868 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 ZNF598Q86UK7 904 aaKnown RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 DNAJB14Q8TBM8 379 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 MAGEE2Q8TD90 523 aaPredicted RBP10.86□□□□□ -0.67
BRF1-204ENST00000392557 VPS50Q96JG6 964 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 TEKT5Q96M29 485 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 GMIPQ9P107 970 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 EBF1Q9UH73 591 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 RNF11Q9Y3C5 154 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PCDHB7Q9Y5E2 793 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 PCDHGA7Q9Y5G6 932 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 CEPT1Q9Y6K0 416 aa10.86□□□□□ -0.67
BRF1-204ENST00000392557 CLOCKO15516 846 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 RPLP2P05387 115 aaKnown RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 FAM163BP0C2L3 166 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 ZNF26P17031 533 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 KCNA5P22460 613 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 YAP1P46937 504 aaKnown RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 RPL26P61254 145 aaKnown RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 NAA20P61599 178 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 SQLEQ14534 574 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 CYP51A1Q16850 503 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 KLHL35Q6PF15 583 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 POTEHQ6S545 545 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 DEFB128Q7Z7B8 93 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 C14orf80Q86SX3 495 aa10.85□□□□□ -0.67
BRF1-204ENST00000392557 RNF168Q8IYW5 571 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 DCP1BQ8IZD4 617 aaKnown RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 TMEM102Q8N9M5 508 aaPredicted RBP10.85□□□□□ -0.67
BRF1-204ENST00000392557 FAM110BQ8TC76 370 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms