RNA–Protein interactions for RNA: ENST00000383282.3

NPHP3-202, Transcript of nephrocystin 3, humanhuman

TSL 1 (best) BASIC

Gene NPHP3, Length 782 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-202ENST00000383282 BPIFA3Q9BQP9 254 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 LGR4Q9BXB1 951 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 PISDQ9UG56 409 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 LOXL2Q9Y4K0 774 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 PCDHGC4Q9Y5F7 938 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 RNF215Q9Y6U7 377 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 LRP4O75096 1905 aa26.45■■□□□ 1.82
NPHP3-202ENST00000383282 KIF26BQ2KJY2 2108 aa26.44■■□□□ 1.82
NPHP3-202ENST00000383282 NUDT21O43809 227 aaKnown RBP26.44■■□□□ 1.82
NPHP3-202ENST00000383282 VIPR1P32241 457 aa26.44■■□□□ 1.82
NPHP3-202ENST00000383282 HLTFQ14527 1009 aaKnown RBP eCLIP26.44■■□□□ 1.82
NPHP3-202ENST00000383282 SMTNL2Q2TAL5 461 aa26.44■■□□□ 1.82
NPHP3-202ENST00000383282 KIAA1614Q5VZ46 1190 aa26.44■■□□□ 1.82
NPHP3-202ENST00000383282 DENND2CQ68D51 928 aa26.44■■□□□ 1.82
NPHP3-202ENST00000383282 SPRED1Q7Z699 444 aa26.44■■□□□ 1.82
NPHP3-202ENST00000383282 HSPH1Q92598 858 aa26.44■■□□□ 1.82
NPHP3-202ENST00000383282 CARS2Q9HA77 564 aaKnown RBP26.44■■□□□ 1.82
NPHP3-202ENST00000383282 ATXN7L1Q9ULK2 861 aaPredicted RBP26.44■■□□□ 1.82
NPHP3-202ENST00000383282 TTC24A2A3L6 582 aaPredicted RBP26.43■■□□□ 1.82
NPHP3-202ENST00000383282 HGFP14210 728 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 AMPD1P23109 780 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 SERPINB6P35237 376 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 ILF3Q12906 894 aaKnown RBP eCLIP26.43■■□□□ 1.82
NPHP3-202ENST00000383282 LY6DQ14210 128 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 CNGA3Q16281 694 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 E4F1Q66K89 784 aaPredicted RBP26.43■■□□□ 1.82
NPHP3-202ENST00000383282 POLNQ7Z5Q5 900 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 ATPAF2Q8N5M1 289 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 CCL4L1Q8NHW4 92 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 NSMCE3Q96MG7 304 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 CMKLR1Q99788 373 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 MGME1Q9BQP7 344 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 GSDMCQ9BYG8 508 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 ACSL6Q9UKU0 697 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 PHTF1Q9UMS5 762 aa26.43■■□□□ 1.82
NPHP3-202ENST00000383282 ZW10O43264 779 aa26.42■■□□□ 1.82
NPHP3-202ENST00000383282 HEXIM1O94992 359 aaKnown RBP26.42■■□□□ 1.82
NPHP3-202ENST00000383282 CCNB1P14635 433 aa26.42■■□□□ 1.82
NPHP3-202ENST00000383282 CR2P20023 1033 aa26.42■■□□□ 1.82
NPHP3-202ENST00000383282 IL1R2P27930 398 aa26.42■■□□□ 1.82
NPHP3-202ENST00000383282 ZFP36L1Q07352 338 aaKnown RBP26.42■■□□□ 1.82
NPHP3-202ENST00000383282 RALGPS1Q5JS13 557 aa26.42■■□□□ 1.82
NPHP3-202ENST00000383282 HEATR4Q86WZ0 1026 aa26.42■■□□□ 1.82
NPHP3-202ENST00000383282 PELI3Q8N2H9 469 aa26.42■■□□□ 1.82
NPHP3-202ENST00000383282 ISCUQ9H1K1 167 aa26.42■■□□□ 1.82
NPHP3-202ENST00000383282 SUDS3Q9H7L9 328 aaPredicted RBP26.42■■□□□ 1.82
NPHP3-202ENST00000383282 STAU2Q9NUL3 570 aaKnown RBP eCLIP26.42■■□□□ 1.82
NPHP3-202ENST00000383282 ANKRD36A6QL64 1941 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 ATMQ13315 3056 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 GOLGA6CA6NDK9 693 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 GOLGA6BA6NDN3 693 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 PSMD11O00231 422 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 NVLO15381 856 aaKnown RBP26.41■■□□□ 1.82
NPHP3-202ENST00000383282 ZIC2O95409 532 aaPredicted RBP26.41■■□□□ 1.82
NPHP3-202ENST00000383282 GOLGA6DP0CG33 693 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 SKILP12757 684 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 PIGHQ14442 188 aaPredicted RBP26.41■■□□□ 1.82
NPHP3-202ENST00000383282 MAP9Q49MG5 647 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 GPBAR1Q8TDU6 330 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 DTD2Q96FN9 168 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 CSPG4P5Q96PW8 444 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 TEX101Q9BY14 249 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 NOD2Q9HC29 1040 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 ETNK2Q9NVF9 386 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 GOLGA6AQ9NYA3 693 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 AKAP7Q9P0M2 348 aaPredicted RBP26.41■■□□□ 1.82
NPHP3-202ENST00000383282 SEPT10Q9P0V9 454 aa26.41■■□□□ 1.82
NPHP3-202ENST00000383282 MAFKO60675 156 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 PEX11BO96011 259 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 LIPCP11150 499 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 KRT10P13645 584 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 CDH6P55285 790 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 BIRC2Q13490 618 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 PEX6Q13608 980 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 TDRD12Q587J7 1177 aaKnown RBP26.4■■□□□ 1.82
NPHP3-202ENST00000383282 MARC1Q5VT66 337 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 RAET1GQ6H3X3 334 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 USP45Q70EL2 814 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 SFTPA2Q8IWL1 248 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 PGBD5Q8N414 524 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 ZDHHC1Q8WTX9 485 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 SEMA4CQ9C0C4 833 aa26.4■■□□□ 1.82
NPHP3-202ENST00000383282 TRNAU1APQ9NX07 287 aaKnown RBP26.4■■□□□ 1.82
NPHP3-202ENST00000383282 HELZ2Q9BYK8 2649 aaKnown RBP26.4■■□□□ 1.82
NPHP3-202ENST00000383282 A0A1B0GTH6 734 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 RHPN2P1A8MT19 583 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 J3QKU1 62 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 RARAP10276 462 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 ITIH1P19827 911 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 ETV3P41162 512 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 MMP13P45452 471 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 MAXP61244 160 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 CDK3Q00526 305 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 TRAF2Q12933 501 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 PHF19Q5T6S3 580 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 ARMC12Q5T9G4 340 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 PIM3Q86V86 326 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 NDUFAF2Q8N183 169 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 TEKT4Q8WW24 435 aa26.39■■□□□ 1.82
NPHP3-202ENST00000383282 MED8Q96G25 268 aa26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms