RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 SPRYD7Q5W111 196 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 PPP4R4Q6NUP7 873 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 DSG4Q86SJ6 1040 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 LSMEM2Q8N112 164 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 SCAIQ8N9R8 606 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 ARRDC4Q8NCT1 418 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 IPMKQ8NFU5 416 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 ELMO1Q92556 727 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 EHD1Q9H4M9 534 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 KLK14Q9P0G3 267 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 EVLQ9UI08 416 aaPredicted RBP13.88□□□□□ -0.19
SDC1-202ENST00000381150 ERGIC3Q9Y282 383 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 USP3Q9Y6I4 520 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 ZBTB24O43167 697 aaPredicted RBP13.88□□□□□ -0.19
SDC1-202ENST00000381150 JCHAINP01591 159 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 SLC4A1P02730 911 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 GABRB3P28472 473 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 AXLP30530 894 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 POLR2IP36954 125 aaKnown RBP13.88□□□□□ -0.19
SDC1-202ENST00000381150 CLCQ05315 142 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 SF3B4Q15427 424 aaKnown RBP eCLIP13.88□□□□□ -0.19
SDC1-202ENST00000381150 KCNJ8Q15842 424 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 ERMP1Q7Z2K6 904 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 STK32CQ86UX6 486 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 ALDH16A1Q8IZ83 802 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 AFAP1L2Q8N4X5 818 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 GLMNQ92990 594 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 GOLGA2P5Q9HBQ8 144 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 TBC1D13Q9NVG8 400 aa13.88□□□□□ -0.19
SDC1-202ENST00000381150 ZNF638Q14966 1978 aaKnown RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 IQCA1LA6NCM1 817 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 TREHO43280 583 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 CRTC3Q6UUV7 619 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 EPHX4Q8IUS5 362 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 ZCCHC7Q8N3Z6 543 aaKnown RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 KDM1BQ8NB78 822 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 TXNDC5Q8NBS9 432 aaKnown RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 SDCCAG3Q96C92 435 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 C9orf16Q9BUW7 83 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 SPC25Q9HBM1 224 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 TNFRSF12AQ9NP84 129 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 ITM2CQ9NQX7 267 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 PNMA8BQ9ULN7 279 aaPredicted RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 CD4P01730 458 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 PABPC1P11940 636 aaKnown RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 IGFBP6P24592 240 aaPredicted RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 TKTP29401 623 aaKnown RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 IDUAP35475 653 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 YBX1P67809 324 aaKnown RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 ZBTB17Q13105 803 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 MFSD10Q14728 455 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 STEAP4Q687X5 459 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 SCIMPQ6UWF3 145 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 CEP97Q8IW35 865 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 CLIP4Q8N3C7 705 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 SMG8Q8ND04 991 aaKnown RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 TRPC4APQ8TEL6 797 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 PARK7Q99497 189 aaKnown RBP13.87□□□□□ -0.19
SDC1-202ENST00000381150 PALMDQ9NP74 551 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 ABCB10Q9NRK6 738 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 TMED5Q9Y3A6 229 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 BRCA2P51587 3418 aa13.87□□□□□ -0.19
SDC1-202ENST00000381150 SLCO1B7G3V0H7 640 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 M0R3G1 203 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 CLPXO76031 633 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 AHSGP02765 367 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 RPS9P46781 194 aaKnown RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 RABL3Q5HYI8 236 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 DHRS4L2Q6PKH6 230 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 C4orf22Q6V702 233 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 BNIPLQ7Z465 357 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SLCO6A1Q86UG4 719 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 CADM3Q8N126 398 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 PCYOX1LQ8NBM8 494 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 PSMA8Q8TAA3 256 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 CHPT1Q8WUD6 406 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SEPT8Q92599 483 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SLC25A23Q9BV35 468 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SMPD3Q9NY59 655 aaPredicted RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 CNOT11Q9UKZ1 510 aaKnown RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 TSC2P49815 1807 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 FAM95CA0A1B0GW59 222 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 H3BMM5 538 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 CRCPO75575 148 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 C8BP07358 591 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 HSPA1AP0DMV8 641 aaKnown RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 HSPA1BP0DMV9 641 aaKnown RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 CXCR3P49682 368 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 PRKAA2P54646 552 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SNX16P57768 344 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 IRF5Q13568 498 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 C6orf10Q5SRN2 563 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 OTUD1Q5VV17 481 aaPredicted RBP13.86□□□□□ -0.19
SDC1-202ENST00000381150 PAQR9Q6ZVX9 377 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 CUZD1Q86UP6 607 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 OSTM1Q86WC4 334 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SPPL2BQ8TCT7 592 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 SLC2A14Q8TDB8 520 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 VPS33AQ96AX1 596 aa13.86□□□□□ -0.19
SDC1-202ENST00000381150 HSFY1Q96LI6 401 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms