RNA–Protein interactions for RNA: ENST00000378125.4

PCDHA4-201, Transcript of protocadherin alpha 4, humanhuman

TSL 5 BASIC

Gene PCDHA4, Length 2,328 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4-201ENST00000378125 CLDN11O75508 207 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 SIX3O95343 332 aaPredicted RBP19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 ENO3P13929 434 aaPredicted RBP19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 FDXRP22570 491 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 PRDX6P30041 224 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 ALDH1A3P47895 512 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 ATXN3P54252 364 aaPredicted RBP19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 ACVR1Q04771 509 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 LRRC36Q1X8D7 754 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 ACBD5Q5T8D3 534 aaPredicted RBP19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 REM2Q8IYK8 340 aaPredicted RBP19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 CARNMT1Q8N4J0 409 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 PDZD8Q8NEN9 1154 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 ZNF461Q8TAF7 563 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 SLC22A12Q96S37 553 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 AFF4Q9UHB7 1163 aaKnown RBP19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 YIPF1Q9Y548 306 aa19.25■□□□□ 0.67
PCDHA4-201ENST00000378125 ATP6AP2A0A1C7CYW4 349 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 PPP6CO00743 305 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 ATP6AP2O75787 350 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 CD1DP15813 335 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 HDCP19113 662 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 SP100P23497 879 aaPredicted RBP19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 VEGFBP49765 207 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 DSELQ8IZU8 1212 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 PPFIBP2Q8ND30 876 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 NPAS2Q99743 824 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 NDE1Q9NXR1 346 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 CCDC189A1A4V9 331 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 H3BMM5 538 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 STX16-NPEPL1H3BU86 382 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 UBXN8O00124 270 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 MAP3K7O43318 606 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 WISP3O95389 354 aaPredicted RBP19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 PRLP01236 227 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 EPOP01588 193 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 HK2P52789 917 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 PKNOX1P55347 436 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 TWF1Q12792 350 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 PDAP1Q13442 181 aaKnown RBP19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 OR4D1Q15615 310 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 ADGRF1Q5T601 910 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 GK5Q6ZS86 529 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 SDCCAG8Q86SQ7 713 aaPredicted RBP19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 CCDC28BQ9BUN5 200 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 RNF208Q9H0X6 261 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 GSTO2Q9H4Y5 243 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 ZNF385DQ9H6B1 395 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 S100A14Q9HCY8 104 aa19.24■□□□□ 0.67
PCDHA4-201ENST00000378125 TRPC5OSA6NMA1 111 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 PRRG1O14668 218 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 C1RP00736 705 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 MBL2P11226 248 aaPredicted RBP19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 MZF1P28698 734 aaPredicted RBP19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 GCKP35557 465 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 STC1P52823 247 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 ARF5P84085 180 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 ANO7Q6IWH7 933 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 KYQ8NBH2 561 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 PLD4Q96BZ4 506 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 CDRT15Q96T59 188 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 ZBTB26Q9HCK0 441 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 RAI2Q9Y5P3 530 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 BACE2Q9Y5Z0 518 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 GPR39O43194 453 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 CRTAMO95727 393 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 CA8P35219 290 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 TLE2Q04725 743 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 PFKFB4Q16877 469 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 TRIM60Q495X7 471 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 ZNF678Q5SXM1 525 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 ALG1LQ6GMV1 187 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 CXorf57Q6NSI4 855 aaKnown RBP19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 RNF111Q6ZNA4 994 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 GALNT7Q86SF2 657 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 CPSF7Q8N684 471 aaKnown RBP19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 CEP70Q8NHQ1 597 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 RP9Q8TA86 221 aaKnown RBP19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 CCDC126Q96EE4 140 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 TDRD1Q9BXT4 1180 aaKnown RBP19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 CXorf56Q9H5V9 222 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 EML4Q9HC35 981 aaKnown RBP19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 POLR3BQ9NW08 1133 aaPredicted RBP19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 GALPQ9UBC7 116 aa19.23■□□□□ 0.67
PCDHA4-201ENST00000378125 A0A1B0GVM2 712 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 ILVBLA1L0T0 632 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 TCAF2A6NFQ2 919 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 H0Y626 953 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 TBL1XO60907 577 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 RHOBTB1O94844 696 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 EFEMP2O95967 443 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 CXCL10P02778 98 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 BMP1P13497 986 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 ACADSP16219 412 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 IMPDH1P20839 514 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 ZNF140P52738 457 aaPredicted RBP19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 MTTPP55157 894 aa19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 SMAD3P84022 425 aaKnown RBP19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 PTGR2Q8N8N7 351 aaPredicted RBP19.22■□□□□ 0.67
PCDHA4-201ENST00000378125 MAB21L3Q8N8X9 362 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms