RNA–Protein interactions for RNA: ENST00000374994.8

TGFBR1-202, Transcript of transforming growth factor beta receptor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFBR1, Length 6,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-202ENST00000374994 CBR4Q8N4T8 237 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 NLNQ9BYT8 704 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 PLK4O00444 970 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 TBX10O75333 385 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 CST3P01034 146 aaPredicted RBP21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 RALGDSQ12967 914 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 PPM1JQ5JR12 505 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 C9orf57Q5W0N0 161 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 NAT8LQ8N9F0 302 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 FAM84AQ96KN4 292 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 ARHGEF4Q9NR80 690 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 SPEF2Q9C093 1822 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 PDHXO00330 501 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 SPTLC1O15269 473 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 SCNN1GP51170 649 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 SEMA5AQ13591 1074 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 REP15Q6BDI9 236 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 LRRN4Q8WUT4 740 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 C1orf21Q9H246 121 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 IGSF9Q9P2J2 1179 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 CXCR2P25025 360 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 RPS6KA3P51812 740 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 POLR2JP52435 117 aaKnown RBP21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 EGFLAMQ63HQ2 1017 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 NXNL1Q96CM4 212 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 SLITRK2Q9H156 845 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 TNFRSF21O75509 655 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 POU5F1Q01860 360 aaKnown RBP21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 VWA5B1Q5TIE3 1220 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 FSTL4Q6MZW2 842 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 VPS4AQ9UN37 437 aa21.2■□□□□ 0.98
TGFBR1-202ENST00000374994 RFXANKO14593 260 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 RNASEH1O60930 286 aaKnown RBP21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 FEN1P39748 380 aaKnown RBP21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 R3HCC1LQ7Z5L2 792 aaKnown RBP21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 ZNF781Q8N8C0 355 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 PHF10Q8WUB8 498 aaKnown RBP21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 IRGQQ8WZA9 623 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 BBS4Q96RK4 519 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 SUV39H1O43463 412 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 MSX2P35548 267 aaPredicted RBP21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 RELL1Q8IUW5 271 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 FCRL2Q96LA5 508 aaPredicted RBP21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 ZFP14Q9HCL3 533 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 RAB25P57735 213 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 SPIDRQ14159 915 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 RALGPS1Q5JS13 557 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 PANX1Q96RD7 426 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 RPP40O75818 363 aaKnown RBP21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 SCELO95171 688 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 STX4Q12846 297 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 PPP4R4Q6NUP7 873 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 ADGRE2Q9UHX3 823 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 TMEM63AO94886 807 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 LINGO1Q96FE5 620 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 CHRAC1Q9NRG0 131 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 ZNF624Q9P2J8 865 aaPredicted RBP21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 AJAP1Q9UKB5 411 aaPredicted RBP21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 LRRC42Q9Y546 428 aa21.19■□□□□ 0.98
TGFBR1-202ENST00000374994 BUD23O43709 281 aaKnown RBP21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 H6PDO95479 791 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 CENPAP49450 140 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 LCP2Q13094 533 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 GNA13Q14344 377 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 C11orf88Q6PI97 169 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 ZNF467Q7Z7K2 595 aaPredicted RBP21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 PACRGLQ8N7B6 248 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 SLC9A7Q96T83 725 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 CD320Q9NPF0 282 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 CNTN6Q9UQ52 1028 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 FFAR3O14843 346 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 GPR42O15529 346 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 CELF2O95319 508 aaKnown RBP21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 KLRC2P26717 231 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 DLG2Q15700 870 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 TRIM40Q6P9F5 258 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 SVOPLQ8N434 492 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 TWIST2Q8WVJ9 160 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 ADI1Q9BV57 179 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 DARSP14868 501 aaKnown RBP21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 ZNF37AP17032 561 aaPredicted RBP21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 NOS3P29474 1203 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 RBFAQ8N0V3 343 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 DCAKDQ8WVC6 231 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.18■□□□□ 0.983e-6■□□□□ 10.4
TGFBR1-202ENST00000374994 DNMT3LQ9UJW3 386 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 ICAM3P32942 547 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 LIPEQ05469 1076 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 CDH24Q86UP0 819 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 C1orf127Q8N9H9 656 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 NUSAP1Q9BXS6 441 aaKnown RBP21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 APOBEC3GQ9HC16 384 aaKnown RBP21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 WBP11Q9Y2W2 641 aaKnown RBP21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 TCAF1Q9Y4C2 921 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 IRGMA1A4Y4 181 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 ZFP28Q8NHY6 868 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 SLC38A2Q96QD8 506 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 PRDM8Q9NQV8 689 aa21.18■□□□□ 0.98
TGFBR1-202ENST00000374994 POLE3Q9NRF9 147 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms