RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 TFAP2DQ7Z6R9 452 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 ZNF354CQ86Y25 554 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 MFN1Q8IWA4 741 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 ABI1Q8IZP0 508 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 BBS5Q8N3I7 341 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 SPATA6LQ8N4H0 392 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 BHLHE22Q8NFJ8 381 aaPredicted RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 DBF4BQ8NFT6 615 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 OR6P1Q8NGX9 317 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 ARRDC2Q8TBH0 407 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 ASB9Q96DX5 294 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 MOCOSQ96EN8 888 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 POLR1EQ9GZS1 481 aaKnown RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 SLC24A3Q9HC58 644 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 TLR8Q9NR97 1041 aaKnown RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 CNOT11Q9UKZ1 510 aaKnown RBP13.97□□□□□ -0.17
HMGCL-203ENST00000374490 LRFN2Q9ULH4 789 aa13.97□□□□□ -0.17
HMGCL-203ENST00000374490 BBIP1A8MTZ0 92 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 J3KR12 359 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 ACOT8O14734 319 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 AURKAO14965 403 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 PARNO95453 639 aaKnown RBP13.96□□□□□ -0.17
HMGCL-203ENST00000374490 ATXN1LP0C7T5 689 aaKnown RBP13.96□□□□□ -0.17
HMGCL-203ENST00000374490 ZCCHC18P0CG32 403 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 ACADVLP49748 655 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 SUOXP51687 545 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 PGGT1BP53609 377 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 PKNOX1P55347 436 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 STX1BP61266 288 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 USP46P62068 366 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 FOLH1Q04609 750 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 EFEMP1Q12805 493 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 PPIGQ13427 754 aaKnown RBP eCLIP13.96□□□□□ -0.17
HMGCL-203ENST00000374490 SERINC3Q13530 473 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 POLD3Q15054 466 aaPredicted RBP13.96□□□□□ -0.17
HMGCL-203ENST00000374490 LIN52Q52LA3 116 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 CLLU1OSQ5K130 101 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 PTAR1Q7Z6K3 402 aaPredicted RBP13.96□□□□□ -0.17
HMGCL-203ENST00000374490 RNF135Q8IUD6 432 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 COLGALT2Q8IYK4 626 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 GALNT15Q8N3T1 639 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 FBXO32Q969P5 355 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 HDAC10Q969S8 669 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 HIPK3Q9H422 1215 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 GSTO2Q9H4Y5 243 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 ELAC1Q9H777 363 aaKnown RBP13.96□□□□□ -0.17
HMGCL-203ENST00000374490 ACSS2Q9NR19 701 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 PAPOLBQ9NRJ5 636 aaKnown RBP13.96□□□□□ -0.17
HMGCL-203ENST00000374490 UXTQ9UBK9 157 aaPredicted RBP13.96□□□□□ -0.17
HMGCL-203ENST00000374490 RIMS3Q9UJD0 308 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 NUDT5Q9UKK9 219 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 TBX21Q9UL17 535 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 TRAF6Q9Y4K3 522 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 PCDHB7Q9Y5E2 793 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 SLC4A7Q9Y6M7 1214 aa13.96□□□□□ -0.17
HMGCL-203ENST00000374490 NYNRINQ9P2P1 1898 aaKnown RBP13.96□□□□□ -0.18
HMGCL-203ENST00000374490 SMIM31A0A1B0GVY4 71 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 NEMP2A6NFY4 417 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 TMEM233B4DJY2 109 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 H0YJX3 145 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 TXNDC9O14530 226 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 PRAMEF11O60813 436 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 RPP40O75818 363 aaKnown RBP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 STAMBPO95630 424 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 GLP2RO95838 553 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 IGLV3-27P01718 113 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 C8BP07358 591 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 SNRPB2P08579 225 aaKnown RBP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 HAPLN1P10915 354 aaPredicted RBP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 HNRNPLP14866 589 aaKnown RBP eCLIP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 MAXP61244 160 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 MRPS22P82650 360 aaKnown RBP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 ROR2Q01974 943 aaKnown RBP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 SMARCB1Q12824 385 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 PDAP1Q13442 181 aaKnown RBP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 ZNF235Q14590 738 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 ALFQ53S48 1182 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 ZNF678Q5SXM1 525 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 REP15Q6BDI9 236 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 ZNF280DQ6N043 979 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 FBXL22Q6P050 247 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 GK5Q6ZS86 529 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 TMEM199Q8N511 208 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 PSMG2Q969U7 264 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 TMA16Q96EY4 203 aaKnown RBP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 MARK4Q96L34 752 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 KLHL5Q96PQ7 755 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 NPAS2Q99743 824 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 EPB41L1Q9H4G0 881 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 CYP4F12Q9HCS2 524 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 PLK2Q9NYY3 685 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.95□□□□□ -0.18
HMGCL-203ENST00000374490 ADA2Q9NZK5 511 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 MARCH2Q9P0N8 246 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 TBC1D30Q9Y2I9 924 aa13.95□□□□□ -0.18
HMGCL-203ENST00000374490 HOXA2O43364 376 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 LDB2O43679 373 aa13.94□□□□□ -0.18
HMGCL-203ENST00000374490 SRP72O76094 671 aaKnown RBP13.94□□□□□ -0.18
HMGCL-203ENST00000374490 CNTN5O94779 1100 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms