RNA–Protein interactions for RNA: ENST00000372748.7

COL9A2-202, Transcript of collagen type IX alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A2, Length 2,862 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-202ENST00000372748 ANKRD49Q8WVL7 239 aa14.83□□□□□ -0.03
COL9A2-202ENST00000372748 SEPT8Q92599 483 aa14.83□□□□□ -0.03
COL9A2-202ENST00000372748 EDEM1Q92611 657 aa14.83□□□□□ -0.03
COL9A2-202ENST00000372748 ACDQ96AP0 544 aa14.83□□□□□ -0.03
COL9A2-202ENST00000372748 HNRNPABQ99729 332 aaKnown RBP14.83□□□□□ -0.03
COL9A2-202ENST00000372748 ZFYVE28Q9HCC9 887 aa14.83□□□□□ -0.03
COL9A2-202ENST00000372748 TBC1D13Q9NVG8 400 aa14.83□□□□□ -0.03
COL9A2-202ENST00000372748 FBXO5Q9UKT4 447 aa14.83□□□□□ -0.03
COL9A2-202ENST00000372748 TRIP12Q14669 1992 aaPredicted RBP14.83□□□□□ -0.04
COL9A2-202ENST00000372748 C1orf232A0A0U1RR37 186 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 MEIS3P2A8K0S8 358 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 ACOX3O15254 700 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 TREHO43280 583 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 PMPCBO75439 489 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 USP17L7P0C7H9 530 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 CAPN3P20807 821 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 KCNC1P48547 511 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 APLP1P51693 650 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 SNX17Q15036 470 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 GEN1Q17RS7 908 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 SV2CQ496J9 727 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 PDCD4Q53EL6 469 aaKnown RBP14.83□□□□□ -0.04
COL9A2-202ENST00000372748 LDLRAP1Q5SW96 308 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 DCLRE1AQ6PJP8 1040 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 LARP4Q71RC2 724 aaKnown RBP eCLIP14.83□□□□□ -0.04
COL9A2-202ENST00000372748 GPRIN1Q7Z2K8 1008 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 DDIASQ8IXT1 998 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 ZNF513Q8N8E2 541 aaPredicted RBP14.83□□□□□ -0.04
COL9A2-202ENST00000372748 PCYOX1LQ8NBM8 494 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 RSPH1Q8WYR4 309 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 CENPNQ96H22 339 aaPredicted RBP14.83□□□□□ -0.04
COL9A2-202ENST00000372748 FAR2Q96K12 515 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 TBL1YQ9BQ87 522 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 C9orf16Q9BUW7 83 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 AKTIPQ9H8T0 292 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 CMTM6Q9NX76 183 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 NCAM2O15394 837 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 ZNF12P17014 697 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 GPX3P22352 226 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 GALNT2Q10471 571 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 NFATC3Q12968 1075 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 SEMA3BQ13214 749 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 ITGADQ13349 1161 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 ATP6AP1Q15904 470 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 CYP2A13Q16696 494 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 UBXN11Q5T124 520 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 C1QTNF12Q5T7M4 302 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 GPR142Q7Z601 462 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 LDB1Q86U70 411 aaPredicted RBP14.83□□□□□ -0.04
COL9A2-202ENST00000372748 DHRSXQ8N5I4 330 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 PACRGLQ8N7B6 248 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 BPIFB6Q8NFQ5 453 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 ZNF420Q8TAQ5 688 aaPredicted RBP14.83□□□□□ -0.04
COL9A2-202ENST00000372748 C19orf60Q96EN9 201 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 DOK1Q99704 481 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 NEURL2Q9BR09 285 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 ALG9Q9H6U8 611 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 OR12D3Q9UGF7 316 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 IPPQ9Y573 584 aa14.83□□□□□ -0.04
COL9A2-202ENST00000372748 RRN3P2A6NIE6 340 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 ARPC2O15144 300 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 CES1P23141 567 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 ELK4P28324 431 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 HALP42357 657 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 PSMD5Q16401 504 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 ZIK1Q3SY52 487 aaPredicted RBP14.82□□□□□ -0.04
COL9A2-202ENST00000372748 CYBRD1Q53TN4 286 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 EGFLAMQ63HQ2 1017 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 GALNT18Q6P9A2 607 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 BNIPLQ7Z465 357 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 CNTN4Q8IWV2 1026 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 ADGRG5Q8IZF4 528 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 DNAJB14Q8TBM8 379 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 PPP1R10Q96QC0 940 aaKnown RBP14.82□□□□□ -0.04
COL9A2-202ENST00000372748 TINF2Q9BSI4 451 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 GSTO2Q9H4Y5 243 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 PIF1Q9H611 641 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 TMEM30AQ9NV96 361 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.82□□□□□ -0.04
COL9A2-202ENST00000372748 A0A087X1B8 175 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 TRIM64A6NGJ6 449 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 ANGPT2O15123 496 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 LRIG2O94898 1065 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 NR4A1P22736 598 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 BDNFP23560 247 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 AFF1P51825 1210 aaKnown RBP14.82□□□□□ -0.04
COL9A2-202ENST00000372748 RABL3Q5HYI8 236 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 OTUD3Q5T2D3 398 aaPredicted RBP14.82□□□□□ -0.04
COL9A2-202ENST00000372748 LINC00523Q86TU6 105 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 PPHLN1Q8NEY8 458 aaKnown RBP14.82□□□□□ -0.04
COL9A2-202ENST00000372748 NPLOC4Q8TAT6 608 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 DQX1Q8TE96 717 aaKnown RBP14.82□□□□□ -0.04
COL9A2-202ENST00000372748 RHOBTB2Q9BYZ6 727 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 FANCEQ9HB96 536 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 NRCAMQ92823 1304 aa14.82□□□□□ -0.04
COL9A2-202ENST00000372748 FXYD1O00168 92 aa14.81□□□□□ -0.04
COL9A2-202ENST00000372748 CCL22O00626 93 aa14.81□□□□□ -0.04
COL9A2-202ENST00000372748 MTSS1O43312 755 aa14.81□□□□□ -0.04
COL9A2-202ENST00000372748 NOL3O60936 208 aaKnown RBP14.81□□□□□ -0.04
COL9A2-202ENST00000372748 RASAL1O95294 804 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms