RNA–Protein interactions for RNA: ENST00000370544.9

LMO4-202, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 5,405 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-202ENST00000370544 C2P06681 752 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 PDZK1Q5T2W1 519 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 ISLR2Q6UXK2 745 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 OFCC1Q8IZS5 231 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 TFAP2BQ92481 460 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 DGCR6LQ9BY27 220 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 APOBEC3GQ9HC16 384 aaKnown RBP19.67■□□□□ 0.74
LMO4-202ENST00000370544 SEPT4O43236 478 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 CD48P09326 243 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 ITGA2P17301 1181 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 CXCR3P49682 368 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 MAPK10P53779 464 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 STX4Q12846 297 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 SEMA5AQ13591 1074 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 RFWD3Q6PCD5 774 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 C16orf62Q7Z3J2 963 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 CENPIQ92674 756 aaPredicted RBP19.67■□□□□ 0.74
LMO4-202ENST00000370544 NOCTQ9UK39 431 aaKnown RBP19.67■□□□□ 0.74
LMO4-202ENST00000370544 TRAFD1O14545 582 aaPredicted RBP19.67■□□□□ 0.74
LMO4-202ENST00000370544 LRATO95237 230 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 AP2A1O95782 977 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 WARSP23381 471 aaKnown RBP19.67■□□□□ 0.74
LMO4-202ENST00000370544 TRAF3Q13114 568 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 REXO5Q96IC2 774 aaKnown RBP19.67■□□□□ 0.74
LMO4-202ENST00000370544 SDCBP2Q9H190 292 aa19.67■□□□□ 0.74
LMO4-202ENST00000370544 ANPEPP15144 967 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 ST13P50502 369 aaKnown RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 CHN2P52757 468 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 LILRA4P59901 499 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 TAF5Q15542 800 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 TTC23Q5W5X9 447 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 FUT10Q6P4F1 479 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 CHRAC1Q9NRG0 131 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 DDX18Q9NVP1 670 aaKnown RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 TBC1D14Q9P2M4 693 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 PCDHB1Q9Y5F3 818 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 SLIT2O94813 1529 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 CACNB4O00305 520 aaPredicted RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 ENTPD5O75356 428 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 NR2F1P10589 423 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 PTDSS1P48651 473 aaKnown RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 SPESP1Q6UW49 350 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 MYOCQ99972 504 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 GRIP2Q9C0E4 1043 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 KLHL25Q9H0H3 589 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 XPNPEP1Q9NQW7 623 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 ARHGEF4Q9NR80 690 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 OR10H2O60403 315 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 DNTTP04053 509 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 AP5B1Q2VPB7 878 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 OR52E6Q96RD3 313 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 TTYH3Q9C0H2 523 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 SLITRK2Q9H156 845 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 MIR1-1HGQ9H1L0 117 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 DAPK2Q9UIK4 370 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 PIPSLA2A3N6 862 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 GSAPA4D1B5 854 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 KLRG2A4D1S0 409 aaPredicted RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 H0Y858 1186 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 SLC22A3O75751 556 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 NDST3O95803 873 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 COL6A2P12110 1019 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 ANXA8L1Q5VT79 327 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 UPF1Q92900 1129 aaKnown RBP eCLIP19.66■□□□□ 0.744e-7■■■□□ 15.7
LMO4-202ENST00000370544 HTATIP2Q9BUP3 242 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 ABCG8Q9H221 673 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 PAPOLBQ9NRJ5 636 aaKnown RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 LYVE1Q9Y5Y7 322 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 RFXANKO14593 260 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 PRMT5O14744 637 aaPredicted RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 PKMP14618 531 aaKnown RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 ITGA1P56199 1179 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 YBEYP58557 167 aaPredicted RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 BIKQ13323 160 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 RNASEH2BQ5TBB1 312 aaKnown RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 TAC4Q86UU9 113 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 REM2Q8IYK8 340 aaPredicted RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 ULK2Q8IYT8 1036 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 IQCKQ8N0W5 287 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 CYP4X1Q8N118 509 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 PYROXD2Q8N2H3 581 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 OR52L1Q8NGH7 329 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 EVLQ9UI08 416 aaPredicted RBP19.66■□□□□ 0.74
LMO4-202ENST00000370544 SLC27A6Q9Y2P4 619 aa19.66■□□□□ 0.74
LMO4-202ENST00000370544 CHRNB2P17787 502 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 CBX2Q14781 532 aaPredicted RBP19.65■□□□□ 0.74
LMO4-202ENST00000370544 C19orf60Q96EN9 201 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 DMAC2Q9NW81 257 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 EFCAB10A6NFE3 127 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 MPSTP25325 297 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 DSC2Q02487 901 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 ZIK1Q3SY52 487 aaPredicted RBP19.65■□□□□ 0.74
LMO4-202ENST00000370544 MFSD5Q6N075 450 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 TTC27Q6P3X3 843 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 C12orf50Q8NA57 414 aaPredicted RBP19.65■□□□□ 0.74
LMO4-202ENST00000370544 CLP1Q92989 425 aaKnown RBP19.65■□□□□ 0.74
LMO4-202ENST00000370544 C12orf42Q96LP6 360 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 TRIM43BA6NCK2 446 aa19.65■□□□□ 0.74
LMO4-202ENST00000370544 NOL9Q5SY16 702 aaKnown RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms