RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 MAML3Q96JK9 1138 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 SLC9A7Q96T83 725 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 SLC25A23Q9BV35 468 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 LMAN2LQ9H0V9 348 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 DCLRE1BQ9H816 532 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 PHPT1Q9NRX4 125 aaPredicted RBP8.56□□□□□ -1.04
ABCA4-201ENST00000370225 CNOT6Q9ULM6 557 aaKnown RBP8.56□□□□□ -1.04
ABCA4-201ENST00000370225 RAI2Q9Y5P3 530 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 SESN1Q9Y6P5 492 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 CDH3P22223 829 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 WNT3AP56704 352 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 MSLNQ13421 630 aaPredicted RBP8.56□□□□□ -1.04
ABCA4-201ENST00000370225 PCBP1Q15365 356 aaKnown RBP eCLIP8.56□□□□□ -1.04
ABCA4-201ENST00000370225 C9orf64Q5T6V5 341 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 VITQ6UXI7 678 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 PPCDCQ96CD2 204 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 GAL3ST4Q96RP7 486 aa8.56□□□□□ -1.04
ABCA4-201ENST00000370225 PRMT3O60678 531 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 LYPLA1O75608 230 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 CDH13P55290 713 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 FSTL1Q12841 308 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 GRSF1Q12849 480 aaKnown RBP eCLIP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ZNF155Q12901 538 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 FBXO15Q8NCQ5 510 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 SHC3Q92529 594 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 OR52E6Q96RD3 313 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 LPIN3Q9BQK8 851 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 DAPK2Q9UIK4 370 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 PTCH2Q9Y6C5 1203 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 KCNE2Q9Y6J6 123 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 EPHB6O15197 1021 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ATG13O75143 517 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 OTCP00480 354 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 LSM3P62310 102 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ST3GAL1Q11201 340 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 SLC25A52Q3SY17 297 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 SAMD4BQ5PRF9 694 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 KLHL35Q6PF15 583 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ABHD15Q6UXT9 468 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 C17orf64Q86WR6 236 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 SLC9A6Q92581 669 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 KCTD15Q96SI1 283 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 OSBPL2Q9H1P3 480 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 INTS7Q9NVH2 962 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 DDX18Q9NVP1 670 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ATP6V1G2O95670 118 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 BCL10O95999 233 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 SP2Q02086 613 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 INTS11Q5TA45 600 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 HMGB4Q8WW32 186 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 PIGKQ92643 395 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 BTN2A3PQ96KV6 586 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 GTPBP2Q9BX10 602 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 CNGB3Q9NQW8 809 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 PDP2Q9P2J9 529 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 IKZF3Q9UKT9 509 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 TPRKBQ9Y3C4 175 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 LOC102724159A0A0B4J2E5 919 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 H3BM21 787 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 FKBP6O75344 327 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 CCNDBP1O95273 360 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 KELP23276 732 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ARF5P84085 180 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 TRAF3Q13114 568 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 SUZ12Q15022 739 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 PWP2Q15269 919 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 CCNYL2Q5T2Q4 361 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 TAPT1Q6NXT6 567 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 BHLHB9Q6PI77 547 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ARHGAP36Q6ZRI8 547 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 CHSY3Q70JA7 882 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 UTS2BQ765I0 119 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 METTL3Q86U44 580 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ADHFE1Q8IWW8 467 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ZNF398Q8TD17 642 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 SMPDL3BQ92485 455 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 RMND5BQ96G75 393 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 FBXW2Q9UKT8 454 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ZNF490Q9ULM2 529 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 MTF2Q9Y483 593 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 RFXANKO14593 260 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 TSPAN1O60635 241 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ZNF132P52740 706 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 CASP9P55211 416 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 TRMT5Q32P41 509 aaKnown RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 CCDC92Q53HC0 331 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 KIAA0408Q6ZU52 694 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 EXOC3L1Q86VI1 746 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 NPAS4Q8IUM7 802 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 CLVS1Q8IUQ0 354 aaPredicted RBP8.55□□□□□ -1.04
ABCA4-201ENST00000370225 P2RY11Q96G91 374 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 SLC38A3Q99624 504 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ZNF670Q9BS34 389 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 PDZD7Q9H5P4 517 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 ZNF304Q9HCX3 659 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 VAV3Q9UKW4 847 aa8.55□□□□□ -1.04
ABCA4-201ENST00000370225 PNMA8CA0A1B0GUJ8 204 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 KHDRBS3O75525 346 aaKnown RBP8.54□□□□□ -1.04
ABCA4-201ENST00000370225 ITGA2BP08514 1039 aa8.54□□□□□ -1.04
ABCA4-201ENST00000370225 SNRPB2P08579 225 aaKnown RBP8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms