RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 EI24O14681 340 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 GJB1P08034 283 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 GFAPP14136 432 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 MATN1P21941 496 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 LAMC2Q13753 1193 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 NEDD8Q15843 81 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 CCL14Q16627 93 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 GALNT18Q6P9A2 607 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 RETREG3Q86VR2 466 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 TBC1D21Q8IYX1 336 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 CRYBG2Q8N1P7 616 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 TTC30BQ8N4P2 665 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 C7orf31Q8N865 590 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 PTCD2Q8WV60 388 aaKnown RBP17.46■□□□□ 0.39
CHTOP-203ENST00000368690 EFHD2Q96C19 240 aaPredicted RBP17.46■□□□□ 0.39
CHTOP-203ENST00000368690 FBXL8Q96CD0 374 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 CPB2Q96IY4 423 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 CAPNS2Q96L46 248 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 ARMC7Q9H6L4 198 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 IGSF5Q9NSI5 407 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 MAP10Q9P2G4 905 aa17.46■□□□□ 0.39
CHTOP-203ENST00000368690 NFKB1P19838 968 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 EIF2B2P49770 351 aaKnown RBP17.45■□□□□ 0.38
CHTOP-203ENST00000368690 GJA9P57773 515 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 ARHGAP1Q07960 439 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 ZNF846Q147U1 533 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 FAM83EQ2M2I3 478 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 BROXQ5VW32 411 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 TP53INP2Q8IXH6 220 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 ZNF668Q96K58 619 aaPredicted RBP17.45■□□□□ 0.38
CHTOP-203ENST00000368690 HEPHQ9BQS7 1158 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 KATNBL1Q9H079 304 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 TUT1Q9H6E5 874 aaKnown RBP17.45■□□□□ 0.38
CHTOP-203ENST00000368690 FLRT1Q9NZU1 646 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 STAP1Q9ULZ2 295 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 VWA7Q9Y334 891 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 TRAF6Q9Y4K3 522 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 SCN1AP35498 2009 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 FAM149AA5PLN7 773 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 A8MT66 165 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 CACNG3O60359 315 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 HBP1O60381 514 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 RBP1P09455 135 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 ALOX5P09917 674 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 TPH1P17752 444 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 ERCC2P18074 760 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 SCAPQ12770 1279 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 SEMA3BQ13214 749 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 NME3Q13232 169 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 ITGADQ13349 1161 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 CYP2A13Q16696 494 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 AGAP9Q5VTM2 703 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 LRRC52Q8N7C0 313 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 SNX31Q8N9S9 440 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 RNF169Q8NCN4 708 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 OR9I1Q8NGQ6 314 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 NTAN1Q96AB6 310 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 KIF12Q96FN5 646 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 TEKT5Q96M29 485 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 SLC39A3Q9BRY0 314 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 MTG1Q9BT17 334 aaPredicted RBP17.45■□□□□ 0.38
CHTOP-203ENST00000368690 RAD21L1Q9H4I0 556 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 TNFRSF12AQ9NP84 129 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 CPQQ9Y646 472 aa17.45■□□□□ 0.38
CHTOP-203ENST00000368690 KRBA1A5PL33 1030 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 NRP1O14786 923 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 ARPC2O15144 300 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 SMPD1P17405 629 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 ARCN1P48444 511 aaKnown RBP17.44■□□□□ 0.38
CHTOP-203ENST00000368690 CLCN3P51790 818 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 TAS2R39P59534 338 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 ZNF460Q14592 562 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 GTF2IRD2BQ6EKJ0 949 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 GTF2IRD2Q86UP8 949 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 PTRH1Q86Y79 214 aaKnown RBP17.44■□□□□ 0.38
CHTOP-203ENST00000368690 C2CD4AQ8NCU7 369 aaPredicted RBP17.44■□□□□ 0.38
CHTOP-203ENST00000368690 TSPEARQ8WU66 669 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 CASP10Q92851 521 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 TAMM41Q96BW9 452 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 GLT1D1Q96MS3 346 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 SMARCAD1Q9H4L7 1026 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 GIT1Q9Y2X7 761 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 FIS1Q9Y3D6 152 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 TSC2P49815 1807 aa17.44■□□□□ 0.38
CHTOP-203ENST00000368690 A0A0J9YYE9 177 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 C1orf232A0A0U1RR37 186 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 CLDN25C9JDP6 229 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 ABCB7O75027 752 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 ALDH1A1P00352 501 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 ZNF286BP0CG31 522 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 PGGT1BP53609 377 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 ZNF33AQ06730 810 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 PITRM1Q5JRX3 1037 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 RBM48Q5RL73 367 aaKnown RBP17.43■□□□□ 0.38
CHTOP-203ENST00000368690 CYHR1Q6ZMK1 362 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 OFCC1Q8IZS5 231 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 OR6J1Q8NGC5 347 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 OR6B3Q8NGW1 331 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 SOCS4Q8WXH5 440 aa17.43■□□□□ 0.38
CHTOP-203ENST00000368690 SNX19Q92543 992 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms