RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 RNF8O76064 485 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 GM2AP17900 193 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 ETV5P41161 510 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 MAPK10P53779 464 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 POLR2LP62875 67 aaKnown RBP10.37□□□□□ -0.75
CLRN3-201ENST00000368671 IL10RBQ08334 325 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 MAMLD1Q13495 774 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 ARHGEF7Q14155 803 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 LBRQ14739 615 aaKnown RBP10.37□□□□□ -0.75
CLRN3-201ENST00000368671 MAP9Q49MG5 647 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 CERCAMQ5T4B2 595 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 PHF19Q5T6S3 580 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 AFMIDQ63HM1 303 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 DENND2CQ68D51 928 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 SPECC1LQ69YQ0 1117 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 USP53Q70EK8 1073 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 TP53INP2Q8IXH6 220 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 PELI3Q8N2H9 469 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 ARFGAP1Q8N6T3 406 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 PDCD6IPQ8WUM4 868 aaKnown RBP10.37□□□□□ -0.75
CLRN3-201ENST00000368671 WDR26Q9H7D7 661 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 PARVAQ9NVD7 372 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 ANO10Q9NW15 660 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 B4GALT6Q9UBX8 382 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 APPL1Q9UKG1 709 aa10.37□□□□□ -0.75
CLRN3-201ENST00000368671 PRAMEF33A0A0G2JMD5 474 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 PRSS38A1L453 326 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 GOLGA6CA6NDK9 693 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 GOLGA6BA6NDN3 693 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 EIF3CLB5ME19 914 aaKnown RBP10.36□□□□□ -0.75
CLRN3-201ENST00000368671 TRAFD1O14545 582 aaPredicted RBP10.36□□□□□ -0.75
CLRN3-201ENST00000368671 SLC28A2O43868 658 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 PRPSAP2O60256 369 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 PRAMEF10O60809 474 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 CPP00450 1065 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 GOLGA6DP0CG33 693 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 LIPCP11150 499 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 PNLIPP16233 465 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 MIPP30301 263 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 RENBPP51606 427 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 MAZP56270 477 aaKnown RBP10.36□□□□□ -0.75
CLRN3-201ENST00000368671 AP1S1P61966 158 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 NSUN2Q08J23 767 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLRN3-201ENST00000368671 SLC10A7Q0GE19 358 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 HLTFQ14527 1009 aaKnown RBP eCLIP10.36□□□□□ -0.75
CLRN3-201ENST00000368671 ZNF235Q14590 738 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 RFTN1Q14699 578 aaPredicted RBP10.36□□□□□ -0.75
CLRN3-201ENST00000368671 STX1AQ16623 288 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 PLEKHA7Q6IQ23 1121 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 PPP1R2P3Q6NXS1 205 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 PNCKQ6P2M8 343 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 OGFOD3Q6PK18 319 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 RBM43Q6ZSC3 357 aaKnown RBP10.36□□□□□ -0.75
CLRN3-201ENST00000368671 TMPRSS9Q7Z410 1059 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 IRF2BP2Q7Z5L9 587 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 SPRED1Q7Z699 444 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 USP7Q93009 1102 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 NUS1Q96E22 293 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 NSMCE3Q96MG7 304 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 EIF3CQ99613 913 aaKnown RBP10.36□□□□□ -0.75
CLRN3-201ENST00000368671 CMKLR1Q99788 373 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 ARHGAP9Q9BRR9 750 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 TRIM7Q9C029 511 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 SEMA6CQ9H3T2 930 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 CARS2Q9HA77 564 aaKnown RBP10.36□□□□□ -0.75
CLRN3-201ENST00000368671 GOLGA6AQ9NYA3 693 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 MYO1AQ9UBC5 1043 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 SEPT3Q9UH03 358 aa10.36□□□□□ -0.75
CLRN3-201ENST00000368671 PTPRQQ9UMZ3 2332 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 BPTFQ12830 3046 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 TMEM191CA6NGB0 347 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 LRRC53A6NM62 1247 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 PDE2AO00408 941 aaPredicted RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 TNFRSF10CO14798 259 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 NVLO15381 856 aaKnown RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 NUDT21O43809 227 aaKnown RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 HOXC4P09017 264 aaPredicted RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 MYCLP1P12525 358 aaPredicted RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 ATP1A3P13637 1013 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 VIPR1P32241 457 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 TRIM23P36406 574 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 GNPDA1P46926 289 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 ZFP36L1Q07352 338 aaKnown RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 NFATC3Q12968 1075 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 BIRC2Q13490 618 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 NCAPHQ15003 741 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 CNGA3Q16281 694 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 ASIC2Q16515 512 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 LINC00303Q3SY05 128 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 AMZ1Q400G9 498 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 MANEAQ5SRI9 462 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 TMCO4Q5TGY1 634 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 CYP4V2Q6ZWL3 525 aaPredicted RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 APTXQ7Z2E3 356 aaKnown RBP10.35□□□□□ -0.75
CLRN3-201ENST00000368671 PRICKLE2Q7Z3G6 844 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 VASH2Q86V25 355 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 HEATR4Q86WZ0 1026 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 ZFAND4Q86XD8 727 aa10.35□□□□□ -0.75
CLRN3-201ENST00000368671 AOPEPQ8N6M6 819 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms