RNA–Protein interactions for RNA: ENST00000368063.5

NCSTN-202, Transcript of nicastrin, humanhuman

TSL 1 (best) BASIC

Gene NCSTN, Length 3,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCSTN-202ENST00000368063 KIFC3Q9BVG8 833 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 C1QTNF7Q9BXJ2 289 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 DNAI2Q9GZS0 605 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 CCNL1Q9UK58 526 aaPredicted RBP13.15□□□□□ -0.3
NCSTN-202ENST00000368063 NUDT5Q9UKK9 219 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 NUP50Q9UKX7 468 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 A0A096LPK6 155 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 AGAP5A6NIR3 686 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 TK2O00142 265 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 SEMA3DO95025 777 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 MLLT6P55198 1093 aaPredicted RBP13.15□□□□□ -0.3
NCSTN-202ENST00000368063 B2MP61769 119 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 CTU2Q2VPK5 515 aaKnown RBP13.15□□□□□ -0.3
NCSTN-202ENST00000368063 NXNL2Q5VZ03 156 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 WDR49Q8IV35 697 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 GPD1LQ8N335 351 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 PLD5Q8N7P1 536 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 PAPD5Q8NDF8 572 aaKnown RBP13.15□□□□□ -0.3
NCSTN-202ENST00000368063 SLC25A23Q9BV35 468 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 ACE2Q9BYF1 805 aaPredicted RBP13.15□□□□□ -0.3
NCSTN-202ENST00000368063 WDR11Q9BZH6 1224 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 DHX35Q9H5Z1 703 aaKnown RBP13.15□□□□□ -0.3
NCSTN-202ENST00000368063 DIABLOQ9NR28 239 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 PCDHB3Q9Y5E6 796 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 SNX5Q9Y5X3 404 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 PTPRJQ12913 1337 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 A8MX80 341 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 AP3D1O14617 1153 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 ARPC2O15144 300 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 GOT2P00505 430 aaKnown RBP13.15□□□□□ -0.3
NCSTN-202ENST00000368063 HSD17B1P14061 328 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 HCAR3P49019 387 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 NAGLUP54802 743 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 TFDP2Q14188 446 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 GRTP1Q5TC63 336 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 HID1Q8IV36 788 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 C8orf59Q8N0T1 100 aaPredicted RBP13.15□□□□□ -0.3
NCSTN-202ENST00000368063 RBBP8Q99708 897 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 OPTCQ9UBM4 332 aa13.15□□□□□ -0.3
NCSTN-202ENST00000368063 TCRBV5S2A0A599 114 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 EXTL3O43909 919 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 ONECUT3O60422 494 aaPredicted RBP13.14□□□□□ -0.31
NCSTN-202ENST00000368063 TRIM16O95361 564 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 CYP2A7P20853 494 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 CDH5P33151 784 aaPredicted RBP13.14□□□□□ -0.31
NCSTN-202ENST00000368063 SLC9A3P48764 834 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 RAD51Q06609 339 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 MEP1AQ16819 746 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 TYSND1Q2T9J0 566 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 PYCR3Q53H96 274 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 NDUFAF5Q5TEU4 345 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 CASC4Q6P4E1 433 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 EMC1Q8N766 993 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 MCFD2Q8NI22 146 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 ARNTL2Q8WYA1 636 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 MARVELD3Q96A59 401 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 LRCH3Q96II8 777 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 METTL2AQ96IZ6 378 aaKnown RBP13.14□□□□□ -0.31
NCSTN-202ENST00000368063 NODALQ96S42 347 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 CPNE1Q99829 537 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 FAM213AQ9BRX8 229 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 GON7Q9BXV9 100 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 TM9SF3Q9HD45 589 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 CAMSAP3Q9P1Y5 1249 aaPredicted RBP13.14□□□□□ -0.31
NCSTN-202ENST00000368063 TJP2Q9UDY2 1190 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 MID2Q9UJV3 735 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 FZD1Q9UP38 647 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 RIPK3Q9Y572 518 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 TRPC5OSA6NMA1 111 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 ZBBXA8MT70 800 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 LDLRP01130 860 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 MPOP05164 745 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 TBXAS1P24557 533 aaPredicted RBP13.14□□□□□ -0.31
NCSTN-202ENST00000368063 GGT5P36269 586 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 CDH6P55285 790 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 KRR1Q13601 381 aaKnown RBP13.14□□□□□ -0.31
NCSTN-202ENST00000368063 PNCKQ6P2M8 343 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 ZBTB33Q86T24 672 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 RETREG3Q86VR2 466 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 P2RY8Q86VZ1 359 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 FBXO11Q86XK2 927 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 SMG8Q8ND04 991 aaKnown RBP13.14□□□□□ -0.31
NCSTN-202ENST00000368063 SPPL2BQ8TCT7 592 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 ROPN1LQ96C74 230 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 BIRC7Q96CA5 298 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 ATXN7L3BQ96GX2 97 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 ASPSCR1Q9BZE9 553 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 SYBUQ9NX95 663 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 USP18Q9UMW8 372 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 PCDHGB1Q9Y5G3 927 aa13.14□□□□□ -0.31
NCSTN-202ENST00000368063 MAP3K6O95382 1288 aa13.13□□□□□ -0.31
NCSTN-202ENST00000368063 ERVK-10P10266 1014 aa13.13□□□□□ -0.31
NCSTN-202ENST00000368063 PGAM1P18669 254 aa13.13□□□□□ -0.31
NCSTN-202ENST00000368063 LIMK2P53671 638 aa13.13□□□□□ -0.31
NCSTN-202ENST00000368063 ARSFP54793 590 aa13.13□□□□□ -0.31
NCSTN-202ENST00000368063 TFAMQ00059 246 aaKnown RBP13.13□□□□□ -0.31
NCSTN-202ENST00000368063 EMX1Q04741 257 aaPredicted RBP13.13□□□□□ -0.31
NCSTN-202ENST00000368063 INCA1Q0VD86 236 aa13.13□□□□□ -0.31
NCSTN-202ENST00000368063 ACOX1Q15067 660 aa13.13□□□□□ -0.31
NCSTN-202ENST00000368063 PTPN20Q4JDL3 420 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms