RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 TFPIP10646 304 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 FCGR2AP12318 317 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 CD99P14209 185 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 IL1R1P14778 569 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 CSF2RAP15509 400 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 EGR1P18146 543 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 POLR2CP19387 275 aaPredicted RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 BCL3P20749 454 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 HNRNPA2B1P22626 353 aaKnown RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 CYP3A7P24462 503 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 GSTM2P28161 218 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 HNRNPH1P31943 449 aaKnown RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 RGRP47804 291 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 MASP1P48740 699 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNF133P52736 654 aaPredicted RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 MFAP1P55081 439 aaKnown RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 XGP55808 180 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ITGADQ13349 1161 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 UBE4AQ14139 1066 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 HLA-BQ31612 363 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 INAVAQ3KP66 663 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 TMEM35AQ53FP2 167 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 PAPPA-AS1Q5QFB9 102 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 GPATCH4Q5T3I0 446 aaKnown RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ANKRD40Q6AI12 368 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 MRNIPQ6NTE8 343 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 FAM171BQ6P995 826 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNF841Q6ZN19 808 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNF534Q76KX8 674 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 MAML2Q8IZL2 1156 aaPredicted RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 EID3Q8N140 333 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 UBR7Q8N806 425 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 CNTD1Q8N815 330 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZMIZ2Q8NF64 920 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 OR52I2Q8NH67 350 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 FAM110DQ8TAY7 271 aaPredicted RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ATOH1Q92858 354 aaPredicted RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 RNF183Q96D59 192 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 FAM122AQ96E09 287 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 SLC45A3Q96JT2 553 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 CFAP57Q96MR6 1250 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 CGRRF1Q99675 332 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 STK33Q9BYT3 514 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 TMX4Q9H1E5 349 aaPredicted RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 SIX2Q9NPC8 291 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ECHDC1Q9NTX5 307 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 BABAM1Q9NWV8 329 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ANKRD10Q9NXR5 420 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 ERAP1Q9NZ08 941 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 IL17BQ9UHF5 180 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 NEU3Q9UQ49 428 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 OR2W1Q9Y3N9 320 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 PCDHGB5Q9Y5G0 923 aa0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 COPG1Q9Y678 874 aaKnown RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 TDRD6O60522 2096 aaKnown RBP0.05□□□□□ -2.4
RNU6-54P-201ENST00000365563 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 IGKV2-28A0A075B6P5 120 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 TBC1D3DA0A087WVF3 549 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 TBC1D3IA0A087WXS9 549 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 TBC1D3EA0A087X179 549 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 TBC1D3KA0A087X1G2 549 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 A0A0G2JLM5 398 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 MEX3AA1L020 520 aaKnown RBP0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 CTAGE9A4FU28 777 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 LRCOL1A6NCL2 159 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 TBC1D3BA6NDS4 549 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 TBC1D3FA6NER0 549 aaPredicted RBP0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 MAGEB17A8MXT2 336 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 ISM1B1AKI9 464 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 TBC1D3LB9A6J9 549 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 IPO7O95373 1038 aaKnown RBP0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 WISP3O95389 354 aaPredicted RBP0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 NADKO95544 446 aaPredicted RBP0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 IGKV2D-28P01615 120 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 ASNSP08243 561 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 CYP3A4P08684 503 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 POU2F2P09086 479 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 TBC1D3HP0C7X1 549 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 CTAGE8P0CG41 777 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 FAM106CPP0CH98 169 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 MYBP10242 640 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 IDEP14735 1019 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 BRAFP15056 766 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 MYOD1P15172 320 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 RPS2P15880 293 aaKnown RBP0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZKSCAN1P17029 563 aaPredicted RBP0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 CCND1P24385 295 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 ATICP31939 592 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 AHRP35869 848 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 PIGAP37287 484 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 UBA7P41226 1012 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 AMPHP49418 695 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 TMEM50BP56557 158 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 LINC00315P59091 139 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 RPS16P62249 146 aaKnown RBP0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 PPIAP62937 165 aaKnown RBP0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 PDE1BQ01064 536 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 DRP2Q13474 957 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 ATP1A4Q13733 1029 aa0.04□□□□□ -2.4
RNU6-54P-201ENST00000365563 CAPSQ13938 189 aa0.04□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms