RNA–Protein interactions for RNA: ENST00000361804.4

SMC3-201, Transcript of structural maintenance of chromosomes 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC3, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC3-201ENST00000361804 DNAJC15Q9Y5T4 150 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 OBSL1O75147 1896 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 TANC1Q9C0D5 1861 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 ZFC3H1O60293 1989 aaKnown RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 A0A0J9YYE9 177 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 PIP5K1BO14986 540 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 CD247P20963 164 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 PRDX3P30048 256 aaKnown RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 PFKPQ01813 784 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 MGAT3Q09327 533 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 MFSD10Q14728 455 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 POLD3Q15054 466 aaPredicted RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 PTPRRQ15256 657 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 PFKFB4Q16877 469 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 NHSL2Q5HYW2 709 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 TBCELQ5QJ74 424 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 C17orf99Q6UX52 265 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 LCA5Q86VQ0 697 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 OR10T2Q8NGX3 314 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 SLC9A7Q96T83 725 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 MEAF6Q9HAF1 191 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 NMUR1Q9HB89 426 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 OAZ3Q9UMX2 235 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 TCRBV3S1A0A5B6 114 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 STRNO43815 780 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 NPHS1O60500 1241 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 CHRNA1P02708 482 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 HSPA1AP0DMV8 641 aaKnown RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 HSPA1BP0DMV9 641 aaKnown RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 GPR15P49685 360 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 PSMD7P51665 324 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 RFTN1Q14699 578 aaPredicted RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 PYCR3Q53H96 274 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 UNC50Q53HI1 259 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 RAB41Q5JT25 222 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 CNTN4Q8IWV2 1026 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 CATSPER1Q8NEC5 780 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 TRPC4APQ8TEL6 797 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 TBATAQ96M53 351 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 RANBP9Q96S59 729 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 TUBB1Q9H4B7 451 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 OSER1Q9NX31 292 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 TMEM181Q9P2C4 612 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 IKZF3Q9UKT9 509 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 MYRFQ9Y2G1 1151 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 MAGED1Q9Y5V3 778 aaPredicted RBP10.6□□□□□ -0.71
SMC3-201ENST00000361804 ARL5AQ9Y689 179 aa10.6□□□□□ -0.71
SMC3-201ENST00000361804 PTPRSQ13332 1948 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 SLCO1B7G3V0H7 640 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 TBX18O95935 607 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 LTA4HP09960 611 aaKnown RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 SQLEQ14534 574 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 SEMA3AQ14563 771 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 DCLRE1AQ6PJP8 1040 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 RANBP10Q6VN20 620 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 LARP4Q71RC2 724 aaKnown RBP eCLIP10.59□□□□□ -0.71
SMC3-201ENST00000361804 LINC00523Q86TU6 105 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 PTGR2Q8N8N7 351 aaPredicted RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 SGCDQ92629 289 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 C19orf60Q96EN9 201 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 FCRL5Q96RD9 977 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 FAM124BQ9H5Z6 455 aaPredicted RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 MID1IP1Q9NPA3 183 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 NDUFA13Q9P0J0 144 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 TMCO1Q9UM00 188 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 AAR2Q9Y312 384 aaKnown RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 TSPAN3O60637 253 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 SUPT3HO75486 399 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 B3GAT3O94766 335 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 HMBSP08397 361 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 ZNF23P17027 643 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 CCR1P32246 355 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 PURAQ00577 322 aaKnown RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 STX5Q13190 355 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 OR4D1Q15615 310 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 CCSAPQ6IQ19 270 aaPredicted RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 ISCA2Q86U28 154 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 CMTR2Q8IYT2 770 aaKnown RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 SEPHS2Q99611 448 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 C1orf50Q9BV19 199 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 NOL6Q9H6R4 1146 aaKnown RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 SEMA4BQ9NPR2 832 aaPredicted RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 CMTM6Q9NX76 183 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 IPO11Q9UI26 975 aaKnown RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 UNCXA6NJT0 531 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 CAPNS1P04632 268 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 SLC7A1P30825 629 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 TXNL4AP83876 142 aaKnown RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 GALNT3Q14435 633 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 LPIN1Q14693 890 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 UGP2Q16851 508 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 MAP7D1Q3KQU3 841 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 ZIK1Q3SY52 487 aaPredicted RBP10.59□□□□□ -0.71
SMC3-201ENST00000361804 ALFQ53S48 1182 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 TRAF7Q6Q0C0 670 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 POTEHQ6S545 545 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 OR13C4Q8NGS5 318 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 IL12RB2Q99665 862 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 MIA3Q5JRA6 1907 aa10.59□□□□□ -0.71
SMC3-201ENST00000361804 RNF103-CHMP3A0A140T963 221 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms