RNA–Protein interactions for RNA: ENST00000361574.9

R3HDM4-201, Transcript of R3H domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene R3HDM4, Length 1,815 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-201ENST00000361574 ZNF296Q8WUU4 475 aaPredicted RBP23.05■■□□□ 1.28
R3HDM4-201ENST00000361574 AGO1Q9UL18 857 aaKnown RBP23.05■■□□□ 1.28
R3HDM4-201ENST00000361574 LRCH1Q9Y2L9 728 aa23.05■■□□□ 1.28
R3HDM4-201ENST00000361574 CCDC189A1A4V9 331 aa23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 PQBP1O60828 265 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 ZNF37AP17032 561 aaPredicted RBP23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 ZNF678Q5SXM1 525 aa23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 CXorf57Q6NSI4 855 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 RNF135Q8IUD6 432 aa23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 FAM136AQ96C01 138 aa23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 SHCBP1LQ9BZQ2 653 aa23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 TFB2MQ9H5Q4 396 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 STK39Q9UEW8 545 aa23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 MAFFQ9ULX9 164 aa23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 YIPF1Q9Y548 306 aa23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 SPO11Q9Y5K1 396 aa23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 COPG1Q9Y678 874 aaKnown RBP23.04■■□□□ 1.28
R3HDM4-201ENST00000361574 TMEM233B4DJY2 109 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 MAP3K7O43318 606 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 HNRNPLP14866 589 aaKnown RBP eCLIP23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 KCNC1P48547 511 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 HERVK_113P63132 956 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 KIAA1841Q6NSI8 718 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 PGAM4Q8N0Y7 254 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 PTERQ96BW5 349 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 TOX2Q96NM4 488 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 SERPINI1Q99574 410 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 SPON2Q9BUD6 331 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 HERC2P3Q9BVR0 1158 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 ERVK-6Q9BXR3 956 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 ALG9Q9H6U8 611 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 SCUBE2Q9NQ36 999 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 GTSE1Q9NYZ3 720 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 VPS9D1Q9Y2B5 631 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 CRYL1Q9Y2S2 319 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 LTBP2Q14767 1821 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 GFRA2O00451 464 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 SMIM24O75264 130 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 SGSHP51688 502 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 PIM3Q86V86 326 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 HERC6Q8IVU3 1022 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 DSELQ8IZU8 1212 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 SHKBP1Q8TBC3 707 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 LPGAT1Q92604 370 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 CATSPER2Q96P56 530 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 RNF38Q9H0F5 515 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 CYP4F11Q9HBI6 524 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 PPM1HQ9ULR3 514 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 ACTL7AQ9Y615 435 aa23.03■■□□□ 1.28
R3HDM4-201ENST00000361574 ZMPSTE24O75844 475 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 ABL2P42684 1182 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 ALDH1A3P47895 512 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 EPHB1P54762 984 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 NAA20P61599 178 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 RAB33AQ14088 237 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 PTPRCAPQ14761 206 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 UNC50Q53HI1 259 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 TMEM198Q66K66 360 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 LIN28BQ6ZN17 250 aaKnown RBP eCLIP23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 PPP1R12CQ9BZL4 782 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 SYTL2Q9HCH5 934 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 CYP4F12Q9HCS2 524 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 UTP6Q9NYH9 597 aaKnown RBP23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 CEP350Q5VT06 3117 aa23.02■■□□□ 1.28
R3HDM4-201ENST00000361574 CD160O95971 181 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 FGF4P08620 206 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 NUDT2P50583 147 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 SCNN1BP51168 640 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 PEX6Q13608 980 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 INO80DQ53TQ3 878 aaPredicted RBP23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 NXNQ6DKJ4 435 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 CNKSR3Q6P9H4 555 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 KBTBD6Q86V97 674 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 MFN1Q8IWA4 741 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 SLC39A11Q8N1S5 342 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 PNPLA1Q8N8W4 532 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 SH3RF2Q8TEC5 729 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 ATOH8Q96SQ7 321 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 ZNF184Q99676 751 aaPredicted RBP23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 DERL2Q9GZP9 239 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 EFCAB1Q9HAE3 211 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 GKN1Q9NS71 199 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 TRAF6Q9Y4K3 522 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 CARNS1A5YM72 827 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 C2orf81A6NN90 581 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 BUD23O43709 281 aaKnown RBP23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 PDE5AO76074 875 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 PMLP29590 882 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 CDC25CP30307 473 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 ATP4BP51164 291 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 CCL23P55773 120 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 ARF5P84085 180 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 IKBKEQ14164 716 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 SQLEQ14534 574 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 VEPH1Q14D04 833 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 PIGGQ5H8A4 983 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 PPM1LQ5SGD2 360 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 ANO7Q6IWH7 933 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 GLT6D1Q7Z4J2 308 aa23.01■■□□□ 1.27
R3HDM4-201ENST00000361574 HPS6Q86YV9 775 aa23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms