RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 OAS3Q9Y6K5 1087 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 ICAM1P05362 532 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 GRIA4P48058 902 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 RPL6Q02878 288 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 SULT2A1Q06520 285 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 CBWD6Q4V339 395 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 FAAH2Q6GMR7 532 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 TMEM86AQ8N2M4 240 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 DNERQ8NFT8 737 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 HM13Q8TCT9 377 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 SOCS4Q8WXH5 440 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 CEP41Q9BYV8 373 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 POLR1EQ9GZS1 481 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 SEMA4BQ9NPR2 832 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 PSMD13Q9UNM6 376 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 CCDC88AQ3V6T2 1871 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 MYH14Q7Z406 1995 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 GDI2P50395 445 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 BOP1Q14137 746 aaKnown RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 FBXO47Q5MNV8 452 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 OGFOD2Q6N063 350 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 ARCQ7LC44 396 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 GALNT5Q7Z7M9 940 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 CIR1Q86X95 450 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 PIGBQ92521 554 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 RTKNQ9BST9 563 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 GSC2O15499 205 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 SCGB2A1O75556 95 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 NOL4O94818 638 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 CCNYL3P0C7X3 344 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 CDH5P33151 784 aaPredicted RBP13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 MTHFRP42898 656 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 NUMBP49757 651 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 UBE2J2Q8N2K1 259 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 AGBL3Q8NEM8 1001 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 ADCY4Q8NFM4 1077 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 ATP13A3Q9H7F0 1226 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 CDHR5Q9HBB8 845 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 STARD7Q9NQZ5 370 aa13.23□□□□□ -0.29
SRGAP3-201ENST00000360413 NTRK1P04629 796 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 CLUP10909 449 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 ANXA8L1Q5VT79 327 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 ANO7Q6IWH7 933 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 ASTN2O75129 1339 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 PGRP06401 933 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 CSF1RP07333 972 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 MAPTP10636 758 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 ARL3P36405 182 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 MECP2P51608 486 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 PPM1LQ5SGD2 360 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 CNSTQ6PJW8 725 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 DSELQ8IZU8 1212 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF350Q9GZX5 532 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 PLEKHA1Q9HB21 404 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 CPS1P31327 1500 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 TRAV19A0A0A6YYK7 116 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 BCKDKO14874 412 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 TMEM62Q0P6H9 643 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 HERC3Q15034 1050 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 ZNF410Q86VK4 478 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 OR10H5Q8NGA6 315 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 TOP1MTQ969P6 601 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 CIB1Q99828 191 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 ZDHHC4Q9NPG8 344 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 M0R036 132 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 AP2S1P53680 142 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 MARSP56192 900 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 CDKL1Q00532 357 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 AUHQ13825 339 aaKnown RBP13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 STYK1Q6J9G0 422 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 AMIGO1Q86WK6 493 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 AASSQ9UDR5 926 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 EDARQ9UNE0 448 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 CLUHO75153 1309 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 SLC12A8A0AV02 714 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 MSX2P35548 267 aaPredicted RBP13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 QPCTQ16769 361 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 KLHL26Q53HC5 615 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 EPHA10Q5JZY3 1008 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 FAM151AQ8WW52 585 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 SGCDQ92629 289 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 DPF3Q92784 378 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 PPP3R2Q96LZ3 170 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 GPER1Q99527 375 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 MTRRQ9UBK8 725 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 VPS26BQ4G0F5 336 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 TRAPPC5Q8IUR0 188 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 CXorf40AQ8TE69 158 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 CXorf40BQ96DE9 158 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 PEX16Q9Y5Y5 336 aa13.22□□□□□ -0.29
SRGAP3-201ENST00000360413 TLX3O43711 291 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 SH3BGRLO75368 114 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 ASGR1P07306 291 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 HOXC8P31273 242 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 CRY1Q16526 586 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 CHST15Q7LFX5 561 aaPredicted RBP13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 C15orf40Q8WUR7 153 aa13.21□□□□□ -0.29
SRGAP3-201ENST00000360413 BLOC1S4Q9NUP1 217 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms