RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 MARCKSL1P49006 195 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 TRIM40Q6P9F5 258 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 TMEM199Q8N511 208 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 RDH11Q8TC12 318 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 PNPT1Q8TCS8 783 aaKnown RBP18.4■□□□□ 0.54
SHANK1-202ENST00000359082 FAR1Q8WVX9 515 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 HDAC10Q969S8 669 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 MTMR9Q96QG7 549 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 ACAT2Q9BWD1 397 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 ACTL7BQ9Y614 415 aa18.4■□□□□ 0.54
SHANK1-202ENST00000359082 RBMXL2O75526 392 aaKnown RBP18.39■□□□□ 0.54
SHANK1-202ENST00000359082 S100A9P06702 114 aaKnown RBP18.39■□□□□ 0.54
SHANK1-202ENST00000359082 FAM131AQ6UXB0 335 aa18.39■□□□□ 0.54
SHANK1-202ENST00000359082 OAFQ86UD1 273 aa18.39■□□□□ 0.54
SHANK1-202ENST00000359082 JAZF1Q86VZ6 243 aa18.39■□□□□ 0.54
SHANK1-202ENST00000359082 CFAP52Q8N1V2 620 aa18.39■□□□□ 0.54
SHANK1-202ENST00000359082 INTS7Q9NVH2 962 aaKnown RBP18.39■□□□□ 0.54
SHANK1-202ENST00000359082 TNS2Q63HR2 1409 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 DHRS12A0PJE2 317 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 ENTPD5O75356 428 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 GNRH1P01148 92 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 IL18R1Q13478 541 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 C12orf56Q8IXR9 622 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 RSL24D1Q9UHA3 163 aaKnown RBP18.39■□□□□ 0.53
SHANK1-202ENST00000359082 hCG_1818297A0A087WSY0 165 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 GJB1P08034 283 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 TNFRSF8P28908 595 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 COX4I2Q96KJ9 171 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 TCF12Q99081 682 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 PRDM8Q9NQV8 689 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 UGT2B17O75795 530 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 ITPKAP23677 461 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 ANKRD52Q8NB46 1076 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 TMEM51Q9NW97 253 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 PCDHGC5Q9Y5F6 944 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 LRRIQ1Q96JM4 1722 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 ELFN1P0C7U0 828 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 AKT2P31751 481 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 TARBP2Q15633 366 aaKnown RBP18.39■□□□□ 0.53
SHANK1-202ENST00000359082 USP41Q3LFD5 358 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 GK5Q6ZS86 529 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 ACE2Q9BYF1 805 aaPredicted RBP18.39■□□□□ 0.53
SHANK1-202ENST00000359082 PRDM12Q9H4Q4 367 aa18.39■□□□□ 0.53
SHANK1-202ENST00000359082 HOXC6P09630 235 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 IDO1P14902 403 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 ZNF846Q147U1 533 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 IMP3Q9NV31 184 aaKnown RBP18.38■□□□□ 0.53
SHANK1-202ENST00000359082 CSH1P0DML2 217 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 CSH2P0DML3 217 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 PSEN1P49768 467 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 GALNT18Q6P9A2 607 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 ARCQ7LC44 396 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 ADAMTSL2Q86TH1 951 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 ZNF670Q9BS34 389 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 DHRS7Q9Y394 339 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 QSOX1O00391 747 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 CD52P31358 61 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 NAA20P61599 178 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 SMCO1Q147U7 214 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 LEMD2Q8NC56 503 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 KLHL5Q96PQ7 755 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 EBNA1BP2Q99848 306 aaKnown RBP18.38■□□□□ 0.53
SHANK1-202ENST00000359082 CLIC5Q9NZA1 410 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 SLC27A6Q9Y2P4 619 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 U3KQV3 271 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 MAGEB3O15480 346 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 PRODHO43272 600 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 GCATO75600 419 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 SLC22A3O75751 556 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 ARHGDIBP52566 201 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 RIOX2Q8IUF8 465 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 ADGRE2Q9UHX3 823 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 A0A1W2PRG6 482 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 TFPIP10646 304 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 FMO1Q01740 532 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 TRAP1Q12931 704 aaKnown RBP18.38■□□□□ 0.53
SHANK1-202ENST00000359082 PTCD2Q8WV60 388 aaKnown RBP18.38■□□□□ 0.53
SHANK1-202ENST00000359082 MYO19Q96H55 970 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 C1QTNF1Q9BXJ1 281 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 PNPLA3Q9NST1 481 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 OSER1Q9NX31 292 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 GIT1Q9Y2X7 761 aa18.38■□□□□ 0.53
SHANK1-202ENST00000359082 NWD1Q149M9 1564 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 CCDC162PA2VCL2 907 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 ERBB2P04626 1255 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 GIMD1P0DJR0 217 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 KCNA10Q16322 511 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 CATSPERGQ6ZRH7 1159 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 FIBCD1Q8N539 461 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 MAB21L3Q8N8X9 362 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 TP53INP1Q96A56 240 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 ACSS2Q9NR19 701 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 ZNF490Q9ULM2 529 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-202ENST00000359082 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-202ENST00000359082 MAFO75444 373 aaPredicted RBP18.37■□□□□ 0.53
SHANK1-202ENST00000359082 PDK4Q16654 411 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 PIK3R6Q5UE93 754 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 SLC34A3Q8N130 599 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 GPC2Q8N158 579 aa18.37■□□□□ 0.53
SHANK1-202ENST00000359082 CDT1Q9H211 546 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms