RNA–Protein interactions for RNA: ENST00000357604.9

UPF2-202, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,193 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-202ENST00000357604 MC4RP32245 332 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 EMBQ6PCB8 327 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 DPY19L3Q6ZPD9 716 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 ZNF567Q8N184 647 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 OR4L1Q8NH43 312 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 ELMO1Q92556 727 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CHFRQ96EP1 664 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 PAIP2Q9BPZ3 127 aaKnown RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 CACYBPQ9HB71 228 aaKnown RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 MRM3Q9HC36 420 aaKnown RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 MAGEE1Q9HCI5 957 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CDV3Q9UKY7 258 aaKnown RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 NME7Q9Y5B8 376 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 C19orf67A6NJJ6 358 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 A8MX80 341 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CDK4P11802 303 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 HLA-FP30511 346 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 LTBRP36941 435 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 GBE1Q04446 702 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 MTM1Q13496 603 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 NR0B2Q15466 257 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 ERCC6LQ2NKX8 1250 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 SNX20Q7Z614 316 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 SYT11Q9BT88 431 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 SYCE1LA8MT33 242 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 GPR89AB7ZAQ6 455 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 VIPP01282 170 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 GPR89BP0CG08 455 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 BRAFP15056 766 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CD27P26842 260 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CCT8P50990 548 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 RPS14P62263 151 aaKnown RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 MGAT5Q09328 741 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CAMK2GQ13555 558 aaPredicted RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 SPARCL1Q14515 664 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 C5orf22Q49AR2 442 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 HID1Q8IV36 788 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CADM4Q8NFZ8 388 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 LMX1AQ8TE12 382 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 ALKBH8Q96BT7 664 aaKnown RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 VWCEQ96DN2 955 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CPNE1Q99829 537 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 GULP1Q9UBP9 304 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 KMOO15229 486 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 MMP20O60882 483 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CD48P09326 243 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CCNFP41002 786 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 YPEL5P62699 121 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 ARHGAP8P85298 464 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 CYTH1Q15438 398 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 ZNF528Q3MIS6 628 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 FAM45BPQ6NSW5 357 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 KCNMB4Q86W47 210 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 DEFB119Q8N690 84 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 FAM45AQ8TCE6 357 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 ATL1Q8WXF7 558 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 SLC17A9Q9BYT1 436 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 ETNK1Q9HBU6 452 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 PRDM6Q9NQX0 595 aa9.2□□□□□ -0.94
UPF2-202ENST00000357604 IARS2Q9NSE4 1012 aaKnown RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 CORO1CQ9ULV4 474 aaPredicted RBP9.2□□□□□ -0.94
UPF2-202ENST00000357604 AP2A2O94973 939 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 TRIM16O95361 564 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 MGAT1P26572 445 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 HNF1BP35680 557 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 SKIV2L2P42285 1042 aaKnown RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 GNPDA1P46926 289 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 SERPINB8P50452 374 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 CRY1Q16526 586 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 MCUQ8NE86 351 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 MYOCQ99972 504 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 RSPH9Q9H1X1 276 aaPredicted RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 ANKRD6Q9Y2G4 727 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 STK38LQ9Y2H1 464 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 GSTA1P08263 222 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 HSD17B2P37059 387 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 CD151P48509 253 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 AFF3P51826 1226 aaKnown RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 SLC10A7Q0GE19 358 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 ZNF765Q7L2R6 523 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 MTERF4Q7Z6M4 381 aaKnown RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 MTBPQ96DY7 904 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 FERD3LQ96RJ6 166 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 PRMT1Q99873 361 aaKnown RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 TRIT1Q9H3H1 467 aaKnown RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 SMYD2Q9NRG4 433 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 SLC6A14Q9UN76 642 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 PCDHGC4Q9Y5F7 938 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 CLGNO14967 610 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 ZNF185O15231 689 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 TFE3P19532 575 aaPredicted RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 POLD2P49005 469 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 NAA20P61599 178 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 USP10Q14694 798 aaKnown RBP9.19□□□□□ -0.94
UPF2-202ENST00000357604 PPM1NQ8N819 430 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 CFAP61Q8NHU2 1237 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 MAPK15Q8TD08 544 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 MGME1Q9BQP7 344 aa9.19□□□□□ -0.94
UPF2-202ENST00000357604 TLR10Q9BXR5 811 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms