RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 METTL3Q86U44 580 aaKnown RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 PM20D2Q8IYS1 436 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 GPATCH1Q9BRR8 931 aaKnown RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 C2orf49Q9BVC5 232 aaPredicted RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 SOHLH2Q9NX45 425 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 PRAMEF33A0A0G2JMD5 474 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 URADA6NGE7 173 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 M0QX08 132 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 PRAMEF10O60809 474 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 PEX11AO75192 247 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 AVILO75366 819 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 RB1P06400 928 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 AMPD1P23109 780 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 CCR4P51679 360 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 TROAPQ12815 778 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 ZMYND11Q15326 602 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 VPS26BQ4G0F5 336 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 ADAMTSL2Q86TH1 951 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 DNAJB3Q8WWF6 145 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 HTATIP2Q9BUP3 242 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.87□□□□□ -0.35
SMC4-202ENST00000357388 TSPAN16Q9UKR8 245 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 ABCC3O15438 1527 aa12.87□□□□□ -0.35
SMC4-202ENST00000357388 NRP2O60462 931 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 TSPAN3O60637 253 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 GCATO75600 419 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 SLC22A3O75751 556 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 MICAL2O94851 1124 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 HMGCRP04035 888 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 PEPDP12955 493 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 RBL1P28749 1068 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 CTSKP43235 329 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 PSEN2P49810 448 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 IFNLR1Q8IU57 520 aaPredicted RBP12.86□□□□□ -0.35
SMC4-202ENST00000357388 GJD3Q8N144 294 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 UROC1Q96N76 676 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 ACE2Q9BYF1 805 aaPredicted RBP12.86□□□□□ -0.35
SMC4-202ENST00000357388 GMIPQ9P107 970 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 TMED5Q9Y3A6 229 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 WRBO00258 174 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 PRKD3O94806 890 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 ZBTB11O95625 1053 aaPredicted RBP12.86□□□□□ -0.35
SMC4-202ENST00000357388 TOP3BO95985 862 aaKnown RBP12.86□□□□□ -0.35
SMC4-202ENST00000357388 ARP10275 920 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 ARF4P18085 180 aaPredicted RBP12.86□□□□□ -0.35
SMC4-202ENST00000357388 IGFBP5P24593 272 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 TTPAP49638 278 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 PLK1P53350 603 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 PHC1P78364 1004 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 IQSEC1Q6DN90 963 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 PYHIN1Q6K0P9 492 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 SLC41A1Q8IVJ1 513 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 PEX5LQ8IYB4 626 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 PGAM4Q8N0Y7 254 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 ZNF558Q96NG5 402 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 TRIM2Q9C040 744 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 KAT8Q9H7Z6 458 aaKnown RBP12.86□□□□□ -0.35
SMC4-202ENST00000357388 CXorf21Q9HAI6 301 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 SMPD4Q9NXE4 827 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 ATPIF1Q9UII2 106 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 SMCO3A2RU48 225 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
SMC4-202ENST00000357388 RBM34P42696 430 aaKnown RBP12.86□□□□□ -0.35
SMC4-202ENST00000357388 SLC7A2P52569 658 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 FAM171BQ6P995 826 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 MPP5Q8N3R9 675 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 CNTD1Q8N815 330 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 GSTCDQ8NEC7 633 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 REPS2Q8NFH8 660 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 OR2T12Q8NG77 320 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 SLC6A15Q9H2J7 730 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 PLA2R1Q13018 1463 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 TRAV19A0A0A6YYK7 116 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 KRT33AO76009 404 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 YES1P07947 543 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 MIPP30301 263 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 SEPHS1P49903 392 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 TOB1P50616 345 aaPredicted RBP12.86□□□□□ -0.35
SMC4-202ENST00000357388 DOK6Q6PKX4 331 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 DEF8Q6ZN54 512 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 RNF44Q7L0R7 432 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 TRABD2AQ86V40 505 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 DAW1Q8N136 415 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 OR8H3Q8N146 312 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 ZNF248Q8NDW4 579 aa12.86□□□□□ -0.35
SMC4-202ENST00000357388 AIREO43918 545 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 AP2A2O94973 939 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ZNF286BP0CG31 522 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 CXCL8P10145 99 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 HERC3Q15034 1050 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 C7orf26Q96N11 449 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 SLC22A4Q9H015 551 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ZNF304Q9HCX3 659 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 NECTIN3Q9NQS3 549 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 RFXANKO14593 260 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 SLC6A2P23975 617 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 LPCAT4Q643R3 524 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 MFSD5Q6N075 450 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ZPBP2Q6X784 338 aa12.85□□□□□ -0.35
SMC4-202ENST00000357388 ALYREFQ86V81 257 aaKnown RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms