RNA–Protein interactions for RNA: ENST00000356887.11

GYPC-202, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 2,067 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-202ENST00000356887 DSC3Q14574 896 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 MYLK3Q32MK0 819 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 KLHDC10Q6PID8 442 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 C17orf99Q6UX52 265 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 SPATA31D4Q6ZUB0 917 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 TFAP2DQ7Z6R9 452 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 FUNDC1Q8IVP5 155 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 HERC6Q8IVU3 1022 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 OR9I1Q8NGQ6 314 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 C3orf30Q96M34 536 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 UROC1Q96N76 676 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 GRIP2Q9C0E4 1043 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 ZCWPW1Q9H0M4 648 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 FBRSL1Q9HCM7 1045 aaKnown RBP17.7■□□□□ 0.42
GYPC-202ENST00000356887 TMEM248Q9NWD8 314 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 RNF11Q9Y3C5 154 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 KCTD3Q9Y597 815 aa17.7■□□□□ 0.42
GYPC-202ENST00000356887 TTC24A2A3L6 582 aaPredicted RBP17.69■□□□□ 0.42
GYPC-202ENST00000356887 OR51F1A6NGY5 319 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 F8W810 466 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 PSMC3P17980 439 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 TM4SF4P48230 202 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 TXNL4AP83876 142 aaKnown RBP17.69■□□□□ 0.42
GYPC-202ENST00000356887 MAP7Q14244 749 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 NRF1Q16656 503 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 IRAK1BP1Q5VVH5 260 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 MSANTD2Q6P1R3 559 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 LAYNQ6UX15 382 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 CXCL17Q6UXB2 119 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 PIM3Q86V86 326 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 SCN4BQ8IWT1 228 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 CLYBLQ8N0X4 340 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 ZFP28Q8NHY6 868 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 ARRDC2Q8TBH0 407 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 PTERQ96BW5 349 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 MPP4Q96JB8 637 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 ZYG11BQ9C0D3 744 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 ZFYVE28Q9HCC9 887 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 SCML2Q9UQR0 700 aa17.69■□□□□ 0.42
GYPC-202ENST00000356887 MTF2Q9Y483 593 aaPredicted RBP17.69■□□□□ 0.42
GYPC-202ENST00000356887 TDRD15B5MCY1 1934 aaKnown RBP17.69■□□□□ 0.42
GYPC-202ENST00000356887 TTC3P53804 2025 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 A0A0U1RQF3 1178 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 LOC285095A0A1B0GVY8 99 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 LDB2O43679 373 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 CNTN5O94779 1100 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 CSPG5O95196 566 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 MT-CO1P00395 513 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 ALDOCP09972 364 aaKnown RBP17.68■□□□□ 0.42
GYPC-202ENST00000356887 OR4Q2P0C623 313 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 ATXN1LP0C7T5 689 aaKnown RBP17.68■□□□□ 0.42
GYPC-202ENST00000356887 SLC2A3P11169 496 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 FDXRP22570 491 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 HERVK_113P63132 956 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 PRAMEP78395 509 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 ALFQ53S48 1182 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 MS4A13Q5J8X5 152 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 HMBOX1Q6NT76 420 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 CYP2R1Q6VVX0 501 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 B3GNT6Q6ZMB0 384 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 MON1AQ86VX9 555 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 PABPC5Q96DU9 382 aaKnown RBP17.68■□□□□ 0.42
GYPC-202ENST00000356887 C19orf60Q96EN9 201 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 ERVK-6Q9BXR3 956 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 ATP6AP2A0A1C7CYW4 349 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 DUSP11O75319 330 aaKnown RBP17.68■□□□□ 0.42
GYPC-202ENST00000356887 ATP6AP2O75787 350 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 AKR1A1P14550 325 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 CD1DP15813 335 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 TBX4P57082 545 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 USP46P62068 366 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 TIAL1Q01085 375 aaKnown RBP eCLIP17.68■□□□□ 0.42
GYPC-202ENST00000356887 ADRM1Q16186 407 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 LRRC23Q53EV4 343 aaPredicted RBP17.68■□□□□ 0.42
GYPC-202ENST00000356887 ZNF549Q6P9A3 640 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 PGBD5Q8N414 524 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 PSMG2Q969U7 264 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 PBXIP1Q96AQ6 731 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 ROPN1LQ96C74 230 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 SLC29A1Q99808 456 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 OSBPL11Q9BXB4 747 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 AKTIPQ9H8T0 292 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 SP110Q9HB58 689 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 RGS18Q9NS28 235 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 POLR3BQ9NW08 1133 aaPredicted RBP17.68■□□□□ 0.42
GYPC-202ENST00000356887 UXTQ9UBK9 157 aaPredicted RBP17.68■□□□□ 0.42
GYPC-202ENST00000356887 PCDHB8Q9UN66 801 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 CRYL1Q9Y2S2 319 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 SNX13Q9Y5W8 968 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 SCN10AQ9Y5Y9 1956 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 BPTFQ12830 3046 aa17.68■□□□□ 0.42
GYPC-202ENST00000356887 MYO16Q9Y6X6 1858 aa17.67■□□□□ 0.42
GYPC-202ENST00000356887 DOCK4Q8N1I0 1966 aa17.67■□□□□ 0.42
GYPC-202ENST00000356887 ARHGEF37A1IGU5 675 aa17.67■□□□□ 0.42
GYPC-202ENST00000356887 FGF4P08620 206 aa17.67■□□□□ 0.42
GYPC-202ENST00000356887 SLC7A2P52569 658 aa17.67■□□□□ 0.42
GYPC-202ENST00000356887 NR1H2P55055 460 aa17.67■□□□□ 0.42
GYPC-202ENST00000356887 STX1BP61266 288 aa17.67■□□□□ 0.42
GYPC-202ENST00000356887 SH3BP2P78314 561 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms