RNA–Protein interactions for RNA: ENST00000355637.8

RBFOX1-203, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 3,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-203ENST00000355637 WDR49Q8IV35 697 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 IPMKQ8NFU5 416 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 DNAJB8Q8NHS0 232 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 WDR48Q8TAF3 677 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 ST6GAL2Q96JF0 529 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 C6orf62Q9GZU0 229 aaPredicted RBP8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 BRD9Q9H8M2 597 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 ING3Q9NXR8 418 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 KCNK4Q9NYG8 393 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 BTBD3Q9Y2F9 522 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 SLIT2O94813 1529 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 HTRA2O43464 458 aaPredicted RBP8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 TLL1O43897 1013 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 TPST1O60507 370 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 IFNB1P01574 187 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 S100A9P06702 114 aaKnown RBP8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 PRG2P13727 222 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 SLC9A1P19634 815 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 GALCP54803 685 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 DEFA1P59665 94 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 DEFA3P59666 94 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 SPIRE1Q08AE8 756 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 CHAF1BQ13112 559 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 KCNJ11Q14654 390 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 VEPH1Q14D04 833 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 CA9Q16790 459 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 DGUOKQ16854 277 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 PTPN20Q4JDL3 420 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 RINT1Q6NUQ1 792 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 NSMFQ6X4W1 530 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 RNF135Q8IUD6 432 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 ZSCAN29Q8IWY8 852 aaPredicted RBP8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 PHOSPHO2Q8TCD6 241 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 DDX1Q92499 740 aaKnown RBP8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 YIPF5Q969M3 257 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 EXOSC8Q96B26 276 aaKnown RBP8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 SPACA7Q96KW9 195 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 HS6ST2Q96MM7 605 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 WDR77Q9BQA1 342 aaPredicted RBP8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 ZNF768Q9H5H4 540 aaKnown RBP8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 SNX15Q9NRS6 342 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 COPZ2Q9P299 210 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 EIF2B4Q9UI10 523 aaKnown RBP8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 STOML2Q9UJZ1 356 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 PCDHA6Q9UN73 950 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 MGAT4BQ9UQ53 548 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 PCDHA8Q9Y5H6 950 aa8.95□□□□□ -0.98
RBFOX1-203ENST00000355637 NRCAMQ92823 1304 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 ADAMTS4O75173 837 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 LYPLA2O95372 231 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 TGDSO95455 350 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 LY86O95711 162 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 POMCP01189 267 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 YWHAEP62258 255 aaKnown RBP8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 AQP6Q13520 282 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 DRAP1Q14919 205 aaPredicted RBP8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 DLGAP5Q15398 846 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 C17orf107Q6ZR85 190 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 DYMQ7RTS9 669 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 FBXO11Q86XK2 927 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 TRIM48Q8IWZ4 208 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 NIM1KQ8IY84 436 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 KDM1BQ8NB78 822 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 ZNF578Q96N58 590 aaPredicted RBP8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 QKIQ96PU8 341 aaKnown RBP eCLIP8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 TRIM62Q9BVG3 475 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 AP5M1Q9H0R1 490 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 IL17RBQ9NRM6 502 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 CNTN3Q9P232 1028 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 VPS9D1Q9Y2B5 631 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 DFFAO00273 331 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 TYROBPO43914 113 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 HTR3BO95264 441 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 MT-ND3P03897 115 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 MBL2P11226 248 aaPredicted RBP8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 NCAM1P13591 858 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 HOXA1P49639 335 aaPredicted RBP8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 PPP5CP53041 499 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 CASP9P55211 416 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 ERVK-25P63136 954 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 PPIL2Q13356 520 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 SSX2Q16385 188 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 ZFP1Q6P2D0 407 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 LRFN4Q6PJG9 635 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 KCTD1Q719H9 257 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 ZNF767PQ75MW2 155 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 IL17RDQ8NFM7 739 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 METTL6Q8TCB7 284 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 CALML4Q96GE6 196 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 ZDHHC12Q96GR4 267 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 FBXL20Q96IG2 436 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 MAGEB10Q96LZ2 347 aaPredicted RBP8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 RIPOR3Q96MK2 946 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 C1QTNF6Q9BXI9 259 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 ERVK-6Q9BXR3 956 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 LHPPQ9H008 270 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 TNKS2Q9H2K2 1166 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 TAS2R9Q9NYW1 312 aa8.94□□□□□ -0.98
RBFOX1-203ENST00000355637 ERVK-18Q9QC07 812 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms