RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 ATP6V1B1P15313 513 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 MAGEA10P43363 369 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-204ENST00000353317 GRIA4P48058 902 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 PPIDQ08752 370 aaKnown RBP8.64□□□□□ -1.03
TRIM55-204ENST00000353317 CYLC2Q14093 348 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-204ENST00000353317 ADGRE1Q14246 886 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 IHHQ14623 411 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 HECTD3Q5T447 861 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 CERCAMQ5T4B2 595 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 AFMIDQ63HM1 303 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 BNC2Q6ZN30 1099 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-204ENST00000353317 DENND1CQ8IV53 801 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 ARL14EPQ8N8R7 260 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-204ENST00000353317 BHLHE22Q8NFJ8 381 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-204ENST00000353317 PHOSPHO2Q8TCD6 241 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 DNAJC1Q96KC8 554 aaKnown RBP8.64□□□□□ -1.03
TRIM55-204ENST00000353317 MARK4Q96L34 752 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 KLF16Q9BXK1 252 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-204ENST00000353317 ACE2Q9BYF1 805 aaPredicted RBP8.64□□□□□ -1.03
TRIM55-204ENST00000353317 DRC3Q9H069 523 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 ZNF385DQ9H6B1 395 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 RAP2CQ9Y3L5 183 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 IRAK3Q9Y616 596 aa8.64□□□□□ -1.03
TRIM55-204ENST00000353317 DFFAO00273 331 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 CCL16O15467 120 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ZBTB24O43167 697 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 PIGNO95427 931 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 PEX11BO96011 259 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 C8AP07357 584 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 IRF1P10914 325 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ENO3P13929 434 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 EPCAMP16422 314 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 PPARGP37231 505 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 GLRBP48167 497 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 CLCN4P51793 760 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 NAGLUP54802 743 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 CDKL1Q00532 357 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 MPP3Q13368 585 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 MAP7Q14244 749 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 LRRC23Q53EV4 343 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 C6orf52Q5T4I8 152 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 IYDQ6PHW0 289 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 KLHDC10Q6PID8 442 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 KCNMB4Q86W47 210 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 KREMEN2Q8NCW0 462 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ZFP28Q8NHY6 868 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 RIN3Q8TB24 985 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 FAM81AQ8TBF8 368 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 USP33Q8TEY7 942 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 SREK1Q8WXA9 508 aaKnown RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 TCEAL4Q96EI5 215 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 VPS39Q96JC1 886 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 BTN2A3PQ96KV6 586 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 KLHL32Q96NJ5 620 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 CATSPER2Q96P56 530 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 PRPF18Q99633 342 aaKnown RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 PKP2Q99959 881 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 APOL2Q9BQE5 337 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 GRIP2Q9C0E4 1043 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 SMG9Q9H0W8 520 aaKnown RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 RBM38Q9H0Z9 239 aaKnown RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 TASP1Q9H6P5 420 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 PRDM16Q9HAZ2 1276 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ENTPD7Q9NQZ7 604 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 OLA1Q9NTK5 396 aaKnown RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 PTTG2Q9NZH5 202 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 BFARQ9NZS9 450 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ATXN10Q9UBB4 475 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 DNMT3LQ9UJW3 386 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 VPS28Q9UK41 221 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 SLC39A10Q9ULF5 831 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 TTC24A2A3L6 582 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 H3BNC9 293 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 J3KR12 359 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 SAT1P21673 171 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 CSRP3P50461 194 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 SH3BGRP55822 239 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 RPS24P62847 133 aaKnown RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 NRG1Q02297 640 aaPredicted RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 RING1Q06587 406 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 GRM3Q14832 879 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 TBC1D25Q3MII6 688 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ZNF697Q5TEC3 545 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 LIPMQ5VYY2 423 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 KCTD11Q693B1 232 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ZFP1Q6P2D0 407 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 OTOP3Q7RTS5 596 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ADGRD2Q7Z7M1 963 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 TMEM126BQ8IUX1 230 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 PGAM4Q8N0Y7 254 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 CPSF7Q8N684 471 aaKnown RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 RTL3Q8N8U3 475 aaKnown RBP8.63□□□□□ -1.03
TRIM55-204ENST00000353317 FAM156AQ8NDB6 213 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ADCY4Q8NFM4 1077 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 HDAC11Q96DB2 347 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 C1QTNF1Q9BXJ1 281 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 Q9H521 79 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 WDR41Q9HAD4 459 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 ZBTB26Q9HCK0 441 aa8.63□□□□□ -1.03
TRIM55-204ENST00000353317 CASS4Q9NQ75 786 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms