RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 PGAM1P18669 254 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 CCNCP24863 283 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 ELAVL4P26378 380 aaKnown RBP8.3□□□□□ -1.08
CD44-205ENST00000352818 PSMB4P28070 264 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 EPHB2P29323 1055 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 TIE1P35590 1138 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 CCNFP41002 786 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 NEK3P51956 506 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 EPHB3P54753 998 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 WDR4P57081 412 aaKnown RBP8.3□□□□□ -1.08
CD44-205ENST00000352818 NIPAL4Q0D2K0 466 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 DNAJC3Q13217 504 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 GPR17Q13304 367 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 SPARCL1Q14515 664 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 IGFBP7Q16270 282 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 PDK4Q16654 411 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 KBTBD12Q3ZCT8 623 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 ARHGAP15Q53QZ3 475 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 ARTNQ5T4W7 220 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 TTC39BQ5VTQ0 682 aaPredicted RBP8.3□□□□□ -1.08
CD44-205ENST00000352818 AFMIDQ63HM1 303 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 KCTD11Q693B1 232 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 INO80CQ6PI98 192 aaPredicted RBP8.3□□□□□ -1.08
CD44-205ENST00000352818 MARK2Q7KZI7 788 aaKnown RBP8.3□□□□□ -1.08
CD44-205ENST00000352818 TAX1BP1Q86VP1 789 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 LRRC6Q86X45 466 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 ARHGAP12Q8IWW6 846 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 RGL4Q8IZJ4 473 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 CPA6Q8N4T0 437 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 ZNF276Q8N554 614 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 TAB3Q8N5C8 712 aaPredicted RBP8.3□□□□□ -1.08
CD44-205ENST00000352818 ANKS4BQ8N8V4 417 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 ANKRD42Q8N9B4 389 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 BANPQ8N9N5 519 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 ATAD1Q8NBU5 361 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 CCDC197Q8NCU1 140 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 OSCP1Q8WVF1 389 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 TTC17Q96AE7 1141 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 STAMBPL1Q96FJ0 436 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 CFAP36Q96G28 342 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 APOPT1Q96IL0 206 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 PLCD4Q9BRC7 762 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 RABEP2Q9H5N1 569 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 ABI2Q9NYB9 513 aaPredicted RBP8.3□□□□□ -1.08
CD44-205ENST00000352818 DONSONQ9NYP3 566 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 CLIC5Q9NZA1 410 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 MOCS1Q9NZB8 636 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 SUSD2Q9UGT4 822 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 CYP8B1Q9UNU6 501 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 IKBKGQ9Y6K9 419 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 CSMD2Q7Z408 3487 aa8.3□□□□□ -1.08
CD44-205ENST00000352818 A0A1B0GTW7 788 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 GOLGA6L7A0A1B0GV03 622 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 A0A1W2PQF6 199 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 A0A1W2PQH9 124 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 TCP11X1B4DZS4 312 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 SNX3O60493 162 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 PAGE1O75459 146 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 CER1O95813 267 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 IGLV3-27P01718 113 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 MT-ND3P03897 115 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 VIMP08670 466 aaKnown RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 SNRPAP09012 282 aaKnown RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 ZDHHC11BP0C7U3 371 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 DHRS4L1P0CG22 281 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 HAPLN1P10915 354 aaPredicted RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 TAC1P20366 129 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 CA4P22748 312 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 CD68P34810 354 aaPredicted RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 HNF1BP35680 557 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 SLC6A11P48066 632 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 IFNAR2P48551 515 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 FOXK1P85037 733 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 ZNF77Q15935 545 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 LACTB2Q53H82 288 aaPredicted RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 TEX44Q53QW1 395 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 SPANXN3Q5MJ09 141 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 LGSNQ5TDP6 509 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 TIGD7Q6NT04 549 aaPredicted RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 TIFABQ6ZNK6 161 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 SH2D5Q6ZV89 423 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 CHSY1Q86X52 802 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 CCDC117Q8IWD4 279 aaPredicted RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 SCN4BQ8IWT1 228 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 ZNF683Q8IZ20 524 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 PGBD3Q8N328 593 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 FAM26EQ8N5C1 309 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 RTL3Q8N8U3 475 aaKnown RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 MAB21L3Q8N8X9 362 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 CCNYQ8ND76 341 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 LRRN4Q8WUT4 740 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 OVCA2Q8WZ82 227 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 RNF34Q969K3 372 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 CABS1Q96KC9 395 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 FCRL2Q96LA5 508 aaPredicted RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 TEKT5Q96M29 485 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 CDK5RAP1Q96SZ6 601 aaKnown RBP8.29□□□□□ -1.08
CD44-205ENST00000352818 IL12RB2Q99665 862 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 GORASP1Q9BQQ3 440 aa8.29□□□□□ -1.08
CD44-205ENST00000352818 TTLL2Q9BWV7 592 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms