RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 SLC22A9Q8IVM8 553 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 SPATA6LQ8N4H0 392 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 NPWQ8N729 165 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 AGBL3Q8NEM8 1001 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 TSPEARQ8WU66 669 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 S100ZQ8WXG8 99 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 TRIB2Q92519 343 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 MUL1Q969V5 352 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 NTAN1Q96AB6 310 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 TMEM125Q96AQ2 219 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 L3HYPDHQ96EM0 354 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 C19orf60Q96EN9 201 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ZNF668Q96K58 619 aaPredicted RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 TEKT5Q96M29 485 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 SLC9A7Q96T83 725 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 SLC30A3Q99726 388 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 TSPYL2Q9H2G4 693 aaPredicted RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 TRPV5Q9NQA5 729 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ANAPC2Q9UJX6 822 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 KDM1AO60341 852 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 PRSS23O95084 383 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 LDLRP01130 860 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ALBP02768 609 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 NCAM1P13591 858 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ELK4P28324 431 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 SLC1A2P43004 574 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 MAPK10P53779 464 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 PITX1P78337 314 aaPredicted RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 NFKB2Q00653 900 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 TRIM32Q13049 653 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 PRPSAP1Q14558 356 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 KCNJ8Q15842 424 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 CYP51A1Q16850 503 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 FAM83EQ2M2I3 478 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ZBTB46Q86UZ6 589 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 CRYBG2Q8N1P7 616 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 MFSD4AQ8N468 514 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 BPIFB6Q8NFQ5 453 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 BPIFB1Q8TDL5 484 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 HDAC2Q92769 488 aaKnown RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 LRRC58Q96CX6 371 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ELMO2Q96JJ3 720 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 SLC2A13Q96QE2 648 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 GPR20Q99678 358 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 DPEP3Q9H4B8 488 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 SOX17Q9H6I2 414 aaPredicted RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 FBRSL1Q9HCM7 1045 aaKnown RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ANKMY1Q9P2S6 941 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 FZD1Q9UP38 647 aa9.68□□□□□ -0.86
HOXA1-201ENST00000343060 DICER1Q9UPY3 1922 aaKnown RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 ZFC3H1O60293 1989 aaKnown RBP9.68□□□□□ -0.86
HOXA1-201ENST00000343060 MSI1O43347 362 aaKnown RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 BCAS1O75363 584 aaPredicted RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 KCNH1O95259 989 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 WISP3O95389 354 aaPredicted RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 RBP1P09455 135 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 CPB1P15086 417 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 GSK3BP49841 420 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 CLCN3P51790 818 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 OCA2Q04671 838 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 PLCL1Q15111 1095 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 AGAP9Q5VTM2 703 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 SPARTQ8N0X7 666 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 PIK3C3Q8NEB9 887 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 CHST13Q8NET6 341 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 MAGEE2Q8TD90 523 aaPredicted RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 SLC22A17Q8WUG5 538 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 C3orf30Q96M34 536 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 RDH12Q96NR8 316 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 MUS81Q96NY9 551 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 AKTIPQ9H8T0 292 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 CDHR5Q9HBB8 845 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 CYP4F12Q9HCS2 524 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 FBXO8Q9NRD0 319 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 ERVK-11Q9UQG0 969 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 SLC27A5Q9Y2P5 690 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 DERAQ9Y315 318 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 PCDHGA11Q9Y5H2 935 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 UNCXA6NJT0 531 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 UBXN8O00124 270 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 ANGPT2O15123 496 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 B4GAT1O43505 415 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 UGT2B11O75310 529 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 HPRP00739 348 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 HTR1AP08908 422 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 LTA4HP09960 611 aaKnown RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 PTPRAP18433 802 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 ITIH1P19827 911 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 IMPDH1P20839 514 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 GSSP48637 474 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 ALDH3A2P51648 485 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 KPNA1P52294 538 aaPredicted RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 EEFSECP57772 596 aaKnown RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 YBX1P67809 324 aaKnown RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 IFITM3Q01628 133 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 CTBP1Q13363 440 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 NDUFA5Q16718 116 aa9.67□□□□□ -0.86
HOXA1-201ENST00000343060 THOC7Q6I9Y2 204 aaKnown RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 KIAA0930Q6ICG6 404 aaPredicted RBP9.67□□□□□ -0.86
HOXA1-201ENST00000343060 TBPL2Q6SJ96 375 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms