RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 DCP2Q8IU60 420 aaKnown RBP15.26■□□□□ 0.03
UBE3B-201ENST00000340074 FAM71DQ8N9W8 422 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 PLA2G15Q8NCC3 412 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 C1orf54Q8WWF1 131 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 NUS1Q96E22 293 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 SPATA13Q96N96 652 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 LYSMD1Q96S90 227 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 GORASP1Q9BQQ3 440 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 ARID1BQ8NFD5 2236 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-201ENST00000340074 C1orf232A0A0U1RR37 186 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 C5orf60A6NFR6 353 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 PSMD11O00231 422 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 ZNF189O75820 626 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-201ENST00000340074 CLDN7O95471 211 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 NDST3O95803 873 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 FGGP02679 453 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 ATP1A1P05023 1023 aaKnown RBP15.26■□□□□ 0.03
UBE3B-201ENST00000340074 ZNF30P17039 623 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 PSMB4P28070 264 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 GDF10P55107 478 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 YPEL5P62699 121 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 MPP3Q13368 585 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 SNX1Q13596 522 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 CDKN3Q16667 212 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 RFLNAQ6ZTI6 216 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 Q6ZVL8 140 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 PELI3Q8N2H9 469 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 OXR1Q8N573 874 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 IPMKQ8NFU5 416 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 DTD2Q96FN9 168 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 MRGPRX2Q96LB1 330 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 FRMD8P1Q9BZ68 369 aaPredicted RBP15.26■□□□□ 0.03
UBE3B-201ENST00000340074 CAAP1Q9H8G2 361 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 OR1A2Q9Y585 309 aa15.26■□□□□ 0.03
UBE3B-201ENST00000340074 SPTY2D1-AS1A0A0U1RR47 76 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 LOC285095A0A1B0GVY8 99 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 K7ESM1 405 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 C1SP09871 688 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 PIRTP0C851 137 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 RXRGP48443 463 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 ARRB1P49407 418 aaPredicted RBP15.25■□□□□ 0.03
UBE3B-201ENST00000340074 STC1P52823 247 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 THOP1P52888 689 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 FZD2Q14332 565 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 OASLQ15646 514 aaKnown RBP15.25■□□□□ 0.03
UBE3B-201ENST00000340074 LONRF2Q1L5Z9 754 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 ZNF542PQ5EBM4 170 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 CCDC70Q6NSX1 233 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 ESRP1Q6NXG1 681 aaKnown RBP15.25■□□□□ 0.03
UBE3B-201ENST00000340074 TECPR1Q7Z6L1 1165 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 APOOQ9BUR5 198 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 CD84Q9UIB8 345 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 PCDHGB2Q9Y5G2 931 aa15.25■□□□□ 0.03
UBE3B-201ENST00000340074 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.25■□□□□ 0.03
UBE3B-201ENST00000340074 TOR1BO14657 336 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 SH3BP5O60239 455 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 PCDHGA12O60330 932 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 GCATO75600 419 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 ANXA9O76027 345 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 EPOP01588 193 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 ATXN1LP0C7T5 689 aaKnown RBP15.24■□□□□ 0.03
UBE3B-201ENST00000340074 MSNP26038 577 aaKnown RBP15.24■□□□□ 0.03
UBE3B-201ENST00000340074 CHRNA4P43681 627 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 TNNT3P45378 269 aaPredicted RBP15.24■□□□□ 0.03
UBE3B-201ENST00000340074 GEMP55040 296 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 BNIP3Q12983 259 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 MTM1Q13496 603 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 PTK2BQ14289 1009 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 PRPSAP1Q14558 356 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 SIRPB2Q5JXA9 342 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 PNCKQ6P2M8 343 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 DBX2Q6ZNG2 339 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 ARHGEF18Q6ZSZ5 1173 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 LYSMD3Q7Z3D4 306 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 PIP4P1Q86T03 277 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 GATAD2AQ86YP4 633 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 NAXDQ8IW45 347 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 SLC25A41Q8N5S1 370 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 DEFB124Q8NES8 71 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 CAMK1GQ96NX5 476 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 FSD1LQ9BXM9 530 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 MAGEE1Q9HCI5 957 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 DNAJC28Q9NX36 388 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 KCTD5Q9NXV2 234 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 SHOC2Q9UQ13 582 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 ZNF148Q9UQR1 794 aa15.24■□□□□ 0.03
UBE3B-201ENST00000340074 ZNF106Q9H2Y7 1883 aaKnown RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 ZFC3H1O60293 1989 aaKnown RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 GOLGA6CA6NDK9 693 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 GOLGA6BA6NDN3 693 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 YKT6O15498 198 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 SDC3O75056 442 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 AGTP01019 485 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 GOLGA6DP0CG33 693 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 EPHA8P29322 1005 aaPredicted RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 STIP1P31948 543 aaKnown RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 EIF2B5Q13144 721 aaKnown RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 SUZ12Q15022 739 aaKnown RBP15.23■□□□□ 0.03
UBE3B-201ENST00000340074 SLC1A5Q15758 541 aa15.23■□□□□ 0.03
UBE3B-201ENST00000340074 CCNG2Q16589 344 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms