RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PPP1R3AQ16821 1122 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 PSAPL1Q6NUJ1 521 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 TRIM67Q6ZTA4 783 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 TAS2R42Q7RTR8 314 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 CMTM8Q8IZV2 173 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 NAT16Q8N8M0 369 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 ING5Q8WYH8 240 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 PTERQ96BW5 349 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 ZFRQ96KR1 1074 aaKnown RBP12.61□□□□□ -0.39
LIMK1-201ENST00000336180 NSUN5Q96P11 429 aaKnown RBP12.61□□□□□ -0.39
LIMK1-201ENST00000336180 CDH19Q9H159 772 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 VWA7Q9Y334 891 aa12.61□□□□□ -0.39
LIMK1-201ENST00000336180 AIM2O14862 343 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 CCDC22O60826 627 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 ANP32DO95626 131 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 GLP2RO95838 553 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 CCR2P41597 374 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 ERVFC1P60507 584 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 RHOAP61586 193 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 ZNF33AQ06730 810 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 SCIMPQ6UWF3 145 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 MFN1Q8IWA4 741 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 RIN3Q8TB24 985 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 CCDC106Q9BWC9 280 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 POLR3BQ9NW08 1133 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-201ENST00000336180 NCKIPSDQ9NZQ3 722 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 SEPT3Q9UH03 358 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 PCDHB12Q9Y5F1 795 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 LOC285095A0A1B0GVY8 99 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 H3BMM5 538 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 UBXN8O00124 270 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 CFLARO15519 480 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 NIPSNAP2O75323 286 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 SUPT7LO94864 414 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 MAPKAPK2P49137 400 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 TCHHL1Q5QJ38 904 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-201ENST00000336180 ARMC12Q5T9G4 340 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 ZYG11AQ6WRX3 759 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 DRAXINQ8NBI3 349 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-201ENST00000336180 CDKN2AIPNLQ96HQ2 116 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 RAB3IPQ96QF0 476 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-201ENST00000336180 MTG2Q9H4K7 406 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 CAMSAP3Q9P1Y5 1249 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-201ENST00000336180 FAM8A1Q9UBU6 413 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 VPS51Q9UID3 782 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 BACE2Q9Y5Z0 518 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 CAPN14A8MX76 684 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 SPECC1L-ADORA2AF8WAN1 911 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 PEX11AO75192 247 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 KLHL2O95198 593 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 CD70P32970 193 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 HTR7P34969 479 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 YBEYP58557 167 aaPredicted RBP12.6□□□□□ -0.39
LIMK1-201ENST00000336180 ECT2LQ008S8 904 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 UGP2Q16851 508 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 GEN1Q17RS7 908 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 INSCQ1MX18 579 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 ACSBG2Q5FVE4 666 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 LIPMQ5VYY2 423 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 ZNF366Q8N895 744 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 OR4L1Q8NH43 312 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 ZNF398Q8TD17 642 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 STYXQ8WUJ0 223 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 KCNA7Q96RP8 456 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 FAM167BQ9BTA0 163 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 IL21Q9HBE4 155 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 WASF2Q9Y6W5 498 aa12.6□□□□□ -0.39
LIMK1-201ENST00000336180 MICAL3Q7RTP6 2002 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 A0A1B0GTL3 188 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 A0A1B0GVM2 712 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 TCAF2A6NFQ2 919 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 MROH6A6NGR9 719 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 CHUKO15111 745 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 C8AP07357 584 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 CALB2P22676 271 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 SLC5A9Q2M3M2 681 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 LSM12Q3MHD2 195 aaKnown RBP12.59□□□□□ -0.39
LIMK1-201ENST00000336180 ILKAPQ9H0C8 392 aaPredicted RBP12.59□□□□□ -0.39
LIMK1-201ENST00000336180 CATSPERZQ9NTU4 200 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 CDH22Q9UJ99 828 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 A8MT66 165 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 KDELR3O43731 214 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 CLDN11O75508 207 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 RHOBTB1O94844 696 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 GRK2P25098 689 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 SOX11P35716 441 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 PFKFB4Q16877 469 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 TRIM68Q6AZZ1 485 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 PAQR3Q6TCH7 311 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 FAM151BQ6UXP7 276 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 FRMD7Q6ZUT3 714 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 RNF168Q8IYW5 571 aaPredicted RBP12.59□□□□□ -0.39
LIMK1-201ENST00000336180 SORCS1Q8WY21 1168 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 FEM1AQ9BSK4 669 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 APOL5Q9BWW9 433 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 MAGEH1Q9H213 219 aa12.59□□□□□ -0.39
LIMK1-201ENST00000336180 MRPL46Q9H2W6 279 aaKnown RBP12.59□□□□□ -0.39
LIMK1-201ENST00000336180 FBRSL1Q9HCM7 1045 aaKnown RBP12.59□□□□□ -0.39
LIMK1-201ENST00000336180 GRID2O43424 1007 aa12.58□□□□□ -0.39
LIMK1-201ENST00000336180 NDST3O95803 873 aa12.58□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms