RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 ZNF398Q8TD17 642 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 U2AF1L4Q8WU68 220 aaKnown RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 SEC14L1Q92503 715 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 CCDC8Q9H0W5 538 aaPredicted RBP6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 ABHD10Q9NUJ1 306 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 FAM96BQ9Y3D0 163 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PCDHB6Q9Y5E3 794 aa6.08□□□□□ -1.44
CDC42BPA-201ENST00000334218 PLA2R1Q13018 1463 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 FBP2O00757 339 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYP1A1P04798 512 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PRKAA2P54646 552 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 NAGLUP54802 743 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MSLNQ13421 630 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PTK6Q13882 451 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CARD17Q5XLA6 110 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PRSS55Q6UWB4 352 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 GLT1D1Q96MS3 346 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ACTL8Q9H568 366 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 LGR6Q9HBX8 967 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAD2L2Q9UI95 211 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADAMTS8Q9UP79 889 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 RIPK3Q9Y572 518 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR2AT4A6NND4 320 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADAMDEC1O15204 470 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 GRIN3BO60391 1043 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 NR2F6P10588 404 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 KCNJ5P48544 419 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CLK3P49761 638 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MANFP55145 182 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 GSTO1P78417 241 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PYDC2Q56P42 97 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PAPD7Q5XG87 772 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ARCQ7LC44 396 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 NOA1Q8NC60 698 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 TECTBQ96PL2 329 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 UGT2B28Q9BY64 529 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 GPR108Q9NPR9 543 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PAG1Q9NWQ8 432 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMEM260Q9NX78 707 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 NUDT5Q9UKK9 219 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 NR2E1Q9Y466 385 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SNX10Q9Y5X0 201 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 FLT1P17948 1338 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 KBTBD13C9JR72 458 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 TSPAN15O95858 294 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 C2P06681 752 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 DNAJB2P25686 324 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMEM132BQ14DG7 1078 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 UPP1Q16831 310 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 HKDC1Q2TB90 917 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF829Q3KNS6 432 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 FNDC3BQ53EP0 1204 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SH3PXD2AQ5TCZ1 1133 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 TEX261Q6UWH6 196 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SAMD12Q8N8I0 201 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 BPIFCQ8NFQ6 507 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 AKR7LQ8NHP1 331 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAGEB18Q96M61 343 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 EBNA1BP2Q99848 306 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CMSS1Q9BQ75 279 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MKNK1Q9BUB5 465 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 TRPV4Q9HBA0 871 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PACSIN3Q9UKS6 424 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 U3KQ87 197 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ERBB4Q15303 1308 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 C2orf78A6NCI8 922 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 FLRT2O43155 660 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MFSD11O43934 449 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 GABBR2O75899 941 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 BEST1O76090 585 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 TJP3O95049 919 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SPP1P10451 314 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PLEKHN1Q494U1 663 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZBED5Q49AG3 693 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MTX3Q5HYI7 312 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PPP1R18Q6NYC8 613 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF615Q8N8J6 731 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 OR8S1Q8NH09 359 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CABP5Q9NP86 173 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CYP39A1Q9NYL5 469 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 SRPK3Q9UPE1 567 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ERVK-19Q9WJR5 959 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 TNFSF12O43508 249 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ZNF432O94892 652 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CSF1P09603 554 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MAOBP27338 520 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MED22Q15528 200 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 RNASEH2BQ5TBB1 312 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 IL31Q6EBC2 164 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CCNI2Q6ZMN8 369 aaPredicted RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 DDX53Q86TM3 631 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 PLEKHO2Q8TD55 490 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 RIT2Q99578 217 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 B3GNT4Q9C0J1 378 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 TMBIM4Q9HC24 238 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 LSM5Q9Y4Y9 91 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 MRPL42Q9Y6G3 142 aaKnown RBP6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 ADGBQ8N7X0 1667 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 NIPSNAP2O75323 286 aa6.07□□□□□ -1.44
CDC42BPA-201ENST00000334218 CLPXO76031 633 aa6.07□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms