RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 PCDH8O95206 1070 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 PIGNO95427 931 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 TCF4P15884 667 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 EPHA3P29320 983 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 CCNFP41002 786 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 GALK1P51570 392 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 PCDH19Q8TAB3 1148 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 GRIN3AQ8TCU5 1115 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 SPATA13Q96N96 652 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 DACH2Q96NX9 599 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 NAT9Q9BTE0 207 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 PALMDQ9NP74 551 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 HACD3Q9P035 362 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 RPL26L1Q9UNX3 145 aaKnown RBP11.83□□□□□ -0.52
HDAC6-201ENST00000334136 ACOT9Q9Y305 439 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 RAD54BQ9Y620 910 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 HS3ST4Q9Y661 456 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 PSMA4P25789 261 aaKnown RBP11.83□□□□□ -0.52
HDAC6-201ENST00000334136 NRLP54845 237 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 CSHL1Q14406 222 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 GRM2Q14416 872 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 TCTN1Q2MV58 587 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 RSPO2Q6UXX9 243 aaPredicted RBP11.83□□□□□ -0.52
HDAC6-201ENST00000334136 IRF7Q92985 503 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 DCUN1D1Q96GG9 259 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 SEPHS2Q99611 448 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 TMEM165Q9HC07 324 aa11.83□□□□□ -0.52
HDAC6-201ENST00000334136 NDRG2Q9UN36 371 aaKnown RBP11.83□□□□□ -0.52
HDAC6-201ENST00000334136 TRPC5OSA6NMA1 111 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 NR5A2O00482 541 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ABLIM3O94929 683 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ATF6P18850 670 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 MAXP61244 160 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 RING1Q06587 406 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 PDGFRLQ15198 375 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 IMPG1Q17R60 797 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 TBCELQ5QJ74 424 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 LY6G5CQ5SRR4 150 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ARMC12Q5T9G4 340 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 SCD5Q86SK9 330 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 GALNT15Q8N3T1 639 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 CLP1Q92989 425 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ULK4Q96C45 1275 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 DNAJC1Q96KC8 554 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 MRPS17Q9Y2R5 130 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 C15orf38-AP3S2A0A0A6YYH1 394 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 MAP3K13O43283 966 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 TIMM44O43615 452 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 AKT1P31749 480 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 WASP42768 502 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 RPS6KA3P51812 740 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 POLR2LP62875 67 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 LBRQ14739 615 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ADRM1Q16186 407 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 UBAP2Q5T6F2 1119 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 VWA5B1Q5TIE3 1220 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 LRRC8BQ6P9F7 803 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ARPINQ7Z6K5 226 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 MICU2Q8IYU8 434 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 TMCO5AQ8N6Q1 288 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 GLIS1Q8NBF1 620 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 CPT1BQ92523 772 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 P2RY11Q96G91 374 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 KLHL25Q9H0H3 589 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 EBF3Q9H4W6 596 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ABCB8Q9NUT2 735 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ETNK2Q9NVF9 386 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 LGALS13Q9UHV8 139 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 AP4B1Q9Y6B7 739 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 DEAF1O75398 565 aaPredicted RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 TRIM16O95361 564 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 IL1BP01584 269 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 FESP07332 822 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 CNTFP26441 200 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 VIPR2P41587 438 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 MAPK8P45983 427 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 MRPL58Q14197 206 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 GPNMBQ14956 572 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 NOMO1Q15155 1222 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 RBBP7Q16576 425 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 FBXL19Q6PCT2 694 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 LINGO4Q6UY18 593 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 AMIGO2Q86SJ2 522 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ZFRQ96KR1 1074 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 KXD1Q9BQD3 176 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 WDR41Q9HAD4 459 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 NCKIPSDQ9NZQ3 722 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 AGO1Q9UL18 857 aaKnown RBP11.82□□□□□ -0.52
HDAC6-201ENST00000334136 NCKAP1Q9Y2A7 1128 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 MYRFQ9Y2G1 1151 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 HEPACAM2A8MVW5 462 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 TM7SF2O76062 418 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 ADH5P11766 374 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 COX4I1P13073 169 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 VCLP18206 1134 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 NFKB1P19838 968 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 PEX2P28328 305 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 POU6F1Q14863 301 aa11.82□□□□□ -0.52
HDAC6-201ENST00000334136 KYAT3Q6YP21 454 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms