RNA–Protein interactions for RNA: ENST00000332797.10

CCDC28A-201, Transcript of coiled-coil domain containing 28A, humanhuman

TSL 1 (best) BASIC

Gene CCDC28A, Length 1,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28A-201ENST00000332797 ATXN1LP0C7T5 689 aaKnown RBP15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 ETS1P14921 441 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 CHRNA4P43681 627 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 ARHGAP8P85298 464 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 OVGP1Q12889 678 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 AGERQ15109 404 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 PARP6Q2NL67 630 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 HLA-BQ31612 363 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 SIRPB2Q5JXA9 342 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 FAXCQ5TGI0 409 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 STPG1Q5TH74 334 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 DRICH1Q6PGQ1 229 aaPredicted RBP15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 IL27RAQ6UWB1 636 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 Q6ZSR6 202 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 GSTA5Q7RTV2 222 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 CCDC89Q8N998 374 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 FAM174AQ8TBP5 190 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 ACTRT1Q8TDG2 376 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 NUS1Q96E22 293 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 LYSMD1Q96S90 227 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 GAREM1Q9H706 876 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 GDF3Q9NR23 364 aa15.91■□□□□ 0.14
CCDC28A-201ENST00000332797 TP53BP1Q12888 1972 aaPredicted RBP15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 GOLGA6CA6NDK9 693 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 GOLGA6BA6NDN3 693 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 CDX4O14627 284 aaPredicted RBP15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 AGTP01019 485 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 EPOP01588 193 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 SLC4A1P02730 911 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 C1SP09871 688 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 GOLGA6DP0CG33 693 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 HLA-DPA1P20036 260 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 ACTN2P35609 894 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 RABIFP47224 123 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 KCNJ1P48048 391 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 STC1P52823 247 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 OLIG2Q13516 323 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 SLC1A5Q15758 541 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 UAP1L1Q3KQV9 507 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 PAPD7Q5XG87 772 aaKnown RBP15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 Q6ZVL8 140 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 LYSMD3Q7Z3D4 306 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 PRUNE1Q86TP1 453 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 SPATS2Q86XZ4 545 aaKnown RBP15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 NETO1Q8TDF5 533 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 DTD2Q96FN9 168 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 CAPZA3Q96KX2 299 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 IL21RQ9HBE5 538 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 GOLGA6AQ9NYA3 693 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 SHOC2Q9UQ13 582 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 DRG1Q9Y295 367 aaKnown RBP15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 ZNF711Q9Y462 761 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 DMXL1Q9Y485 3027 aa15.9■□□□□ 0.14
CCDC28A-201ENST00000332797 CACNA1EQ15878 2313 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 PTPRZ1P23471 2315 aaPredicted RBP15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 CFAP54Q96N23 3096 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 FANCGO15287 622 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 FGF1P05230 155 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 PTSQ03393 145 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 SPARCL1Q14515 664 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 INPP5AQ14642 412 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 CDKN3Q16667 212 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 PRAMEF14Q5SWL7 426 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 RFLNAQ6ZTI6 216 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 SLC22A18ASQ8N1D0 253 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 CBARPQ8N350 705 aaPredicted RBP15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 GLIS1Q8NBF1 620 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 PLA2G15Q8NCC3 412 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 CCHCR1Q8TD31 782 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 TRIM44Q96DX7 344 aaPredicted RBP15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 TBL1YQ9BQ87 522 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 APOL2Q9BQE5 337 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 MAGEE1Q9HCI5 957 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 CD84Q9UIB8 345 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 CDV3Q9UKY7 258 aaKnown RBP15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 FNDC3AQ9Y2H6 1198 aaKnown RBP15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 SPO11Q9Y5K1 396 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 SAR1BQ9Y6B6 198 aa15.89■□□□□ 0.13
CCDC28A-201ENST00000332797 TMEM131Q92545 1883 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 GOLGA6L10A0A0M3HER8 536 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 USP12O75317 370 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 ADRA1AP35348 466 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 LIMK1P53667 647 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 PFN3P60673 137 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 MTM1Q13496 603 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 PDE1CQ14123 709 aaPredicted RBP15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 RSPO4Q2I0M5 234 aaPredicted RBP15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 ZNF423Q2M1K9 1284 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 TTC27Q6P3X3 843 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 TECPR1Q7Z6L1 1165 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 MAGOHBQ96A72 148 aaKnown RBP15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 LRRC45Q96CN5 670 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 GPR63Q9BZJ6 419 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 ZFYVE1Q9HBF4 777 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 KCTD5Q9NXV2 234 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 PAK5Q9P286 719 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 OR1A2Q9Y585 309 aa15.88■□□□□ 0.13
CCDC28A-201ENST00000332797 K7ESM1 405 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 ZSCAN5DPP0CG00 497 aa15.87■□□□□ 0.13
CCDC28A-201ENST00000332797 FDFT1P37268 417 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms