RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 BTAF1O14981 1849 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 ABCA3Q99758 1704 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 IGKV6-21A0A0C4DH24 114 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 MATN3O15232 486 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 NCK1P16333 377 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF12P17014 697 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 CPT1AP50416 773 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 DEFA1P59665 94 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 DEFA3P59666 94 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 MYBPC1Q00872 1141 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 DGCR6Q14129 220 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 CCNYL2Q5T2Q4 361 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 GLYATQ6IB77 296 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 SH2D5Q6ZV89 423 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 SEMA3CQ99985 751 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 MUC13Q9H3R2 512 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 ZNF112Q9UJU3 913 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 C3orf18Q9UK00 162 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 TPRKBQ9Y3C4 175 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 ANKRD12Q6UB98 2062 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 CCL15-CCL14A0A0B4J2E2 113 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 SLC12A8A0AV02 714 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 MLYCDO95822 493 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 OR1E1P30953 314 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 DMC1Q14565 340 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 MFSD10Q14728 455 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 CCL15Q16663 113 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 BRMS1LQ5PSV4 323 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 CLEC20AQ6ZU45 233 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 TAC4Q86UU9 113 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 ADHFE1Q8IWW8 467 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 SETD9Q8NE22 299 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 FBXO32Q969P5 355 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 FCRL5Q96RD9 977 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 KIFC1Q9BW19 673 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 HIPK3Q9H422 1215 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 FANCEQ9HB96 536 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 LOXHD1Q8IVV2 1947 aa12.75□□□□□ -0.37
DNMT3A-202ENST00000321117 HMX2A2RU54 273 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 H3BNH8 94 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 CD3EAPO15446 510 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 ANXA6P08133 673 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 SLC35E2BP0CK96 405 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 SMIM10L2AP0DMW4 78 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 SMIM10L2BP0DMW5 78 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 UMPSP11172 480 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 DNAJB1P25685 340 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 TOP3AQ13472 1001 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 TSTD2Q5T7W7 516 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 TMEM26Q6ZUK4 368 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 ANKRD23Q86SG2 305 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 PROSER1Q86XN7 944 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 PPM1MQ96MI6 270 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 ZFP42Q96MM3 310 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 MAGEL2Q9UJ55 1249 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 PTBP2Q9UKA9 531 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 IPPQ9Y573 584 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 IL2P60568 153 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 LSM3P62310 102 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 RBM20Q5T481 1227 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 TP53INP2Q8IXH6 220 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 NKAPQ8N5F7 415 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 ATG16L2Q8NAA4 619 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 RNF181Q9P0P0 153 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 SLC2A6Q9UGQ3 507 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 ITGB1BP2Q9UKP3 347 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 PRG3Q9Y2Y8 225 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 A0A0J9YVX5 310 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 MYBPHLA2RUH7 354 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 MSI1O43347 362 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 GRID2O43424 1007 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 CST1P01037 141 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 ALOX15P16050 662 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 HCAR3P49019 387 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 SCNN1GP51170 649 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 CDKL1Q00532 357 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 BNIP3Q12983 259 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 LDLRAP1Q5SW96 308 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 GPRIN3Q6ZVF9 776 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 MAVSQ7Z434 540 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 SPATA19Q7Z5L4 167 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 THAP5Q7Z6K1 395 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 RALGPS2Q86X27 583 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 CCDC103Q8IW40 242 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 TBATAQ96M53 351 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 SEPT5Q99719 369 aaPredicted RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 RIBC2Q9H4K1 309 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 FBRSL1Q9HCM7 1045 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 UBAP1Q9NZ09 502 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 TBC1D30Q9Y2I9 924 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 F5H5T6 163 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 PFKMP08237 780 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 MTHFD1P11586 935 aaKnown RBP12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 IMPDH1P20839 514 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 MAGEA3P43357 314 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 RAB15P59190 212 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 GALNT2Q10471 571 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 PPP1R3AQ16821 1122 aa12.74□□□□□ -0.37
DNMT3A-202ENST00000321117 PTPRNQ16849 979 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms