RNA–Protein interactions for RNA: ENST00000316399.10

SOX6-201, Transcript of SRY-box 6, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SOX6, Length 8,808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX6-201ENST00000316399 PRICKLE1Q96MT3 831 aaPredicted RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 POPDC3Q9HBV1 291 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 KLK14Q9P0G3 267 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 CNTN3Q9P232 1028 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 AGO1Q9UL18 857 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 V9GYQ6 96 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 C1orf232A0A0U1RR37 186 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 RNF225M0QZC1 329 aaPredicted RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 GOT1P17174 413 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 HSD17B2P37059 387 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 ATP4BP51164 291 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 WNT3AP56704 352 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 FBXW4P57775 412 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 AMHR2Q16671 573 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 PHACTR4Q8IZ21 702 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 COPS8Q99627 209 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 ACBD6Q9BR61 282 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 CNOT11Q9UKZ1 510 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 ING4Q9UNL4 249 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 R3HDM2Q9Y2K5 976 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 CICQ96RK0 1608 aaPredicted RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 C4BPAP04003 597 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 SP100P23497 879 aaPredicted RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 MLH1P40692 756 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 KIR3DL1P43629 444 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 UGT2B15P54855 530 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 SPIDRQ14159 915 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 GK3PQ14409 553 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 ZNHIT3Q15649 155 aaPredicted RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 SMAD1Q15797 465 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 SLC5A9Q2M3M2 681 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 SEZ6Q53EL9 994 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 COQ5Q5HYK3 327 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 SRFBP1Q8NEF9 429 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 PHF10Q8WUB8 498 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 SLC22A17Q8WUG5 538 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 ZFAND2BQ8WV99 257 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 LGMNQ99538 433 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 PCBD2Q9H0N5 130 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 POLR1BQ9H9Y6 1135 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 ERVK-5Q9HDB9 667 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 NUDT5Q9UKK9 219 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 FADS3Q9Y5Q0 445 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 STYXL1Q9Y6J8 313 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 CCDC162PA2VCL2 907 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 NR2F6P10588 404 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 GSTM5P46439 218 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 EIF2B2P49770 351 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 GSCP56915 257 aaPredicted RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 MBTD1Q05BQ5 628 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 ZNF420Q8TAQ5 688 aaPredicted RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 GPR20Q99678 358 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 STARD7Q9NQZ5 370 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 AP1M2Q9Y6Q5 423 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 SLC22A1O15245 554 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 CELF2O95319 508 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 PAPSS2O95340 614 aaPredicted RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 USP17L7P0C7H9 530 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 ZCCHC23Q6ZST2 131 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 WDR36Q8NI36 951 aaKnown RBP7.23□□□□□ -1.25
SOX6-201ENST00000316399 ASZ1Q8WWH4 475 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 PHF21BQ96EK2 531 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 EHD3Q9NZN3 535 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 SEC14L4Q9UDX3 406 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 IKZF3Q9UKT9 509 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 TIAM2Q8IVF5 1701 aa7.23□□□□□ -1.25
SOX6-201ENST00000316399 CDH5P33151 784 aaPredicted RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 GUCA1AP43080 201 aaPredicted RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 PTGER3P43115 390 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 MTM1Q13496 603 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 FAM46CQ5VWP2 391 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 TMEM106CQ9BVX2 250 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 PAIP1Q9H074 479 aaKnown RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 OXSMQ9NWU1 459 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 LYPLA1O75608 230 aaPredicted RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 STK16O75716 305 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 HSMCR30P0CW71 290 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 NECAB2Q7Z6G3 386 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 GLIS3Q8NEA6 775 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 EDEM1Q92611 657 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 SLC47A1Q96FL8 570 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 SEMA3GQ9NS98 782 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 DNAJC11Q9NVH1 559 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 ARL8BQ9NVJ2 186 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 SPG21Q9NZD8 308 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 GMIPQ9P107 970 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 SUCOQ9UBS9 1254 aaKnown RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 ZNF142P52746 1687 aaPredicted RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 BAZ2BQ9UIF8 2168 aaKnown RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 MATN3O15232 486 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 FMO4P31512 558 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 SDC2P34741 201 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 RPS9P46781 194 aaKnown RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 ITGADQ13349 1161 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 MKRN4PQ13434 485 aaPredicted RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 PRKD1Q15139 912 aaPredicted RBP7.22□□□□□ -1.25
SOX6-201ENST00000316399 QPRTQ15274 297 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 TIGD2Q4W5G0 525 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 CCDC36Q8IYA8 594 aa7.22□□□□□ -1.25
SOX6-201ENST00000316399 OR5B17Q8NGF7 314 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms