RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 SP100P23497 879 aaPredicted RBP13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 SERPINA4P29622 427 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 HALP42357 657 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 PPP3CCP48454 512 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 AFF1P51825 1210 aaKnown RBP13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 ACAP2Q15057 778 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 C14orf80Q86SX3 495 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 PQLC1Q8N2U9 271 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 ZNF555Q8NEP9 628 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 NMD3Q96D46 503 aaKnown RBP13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 NSMCE2Q96MF7 247 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 HIPK3Q9H422 1215 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 PARVBQ9HBI1 364 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 MRPL17Q9NRX2 175 aaKnown RBP13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 CLIC5Q9NZA1 410 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 OPTCQ9UBM4 332 aa13.43□□□□□ -0.26
PCDHB9-201ENST00000316105 RPS24P62847 133 aaKnown RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 HJURPQ8NCD3 748 aaPredicted RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 SLC7A6OSQ96CW6 309 aaPredicted RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 C19orf60Q96EN9 201 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 GPR21Q99679 349 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 FAM126AQ9BYI3 521 aaPredicted RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 CCSER2Q9H7U1 834 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 ARL5AQ9Y689 179 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 COL4A5P29400 1685 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 NRP2O60462 931 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 CNTN5O94779 1100 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 MLYCDO95822 493 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 KRT6AP02538 564 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 KRT6BP04259 564 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 SPATA31D3P0C874 917 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 KRT6CP48668 564 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 PGGT1BP53609 377 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 SCAPQ12770 1279 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 GTF2H3Q13889 308 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 CCDC92Q53HC0 331 aaPredicted RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 FAM151BQ6UXP7 276 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 SPATA31D4Q6ZUB0 917 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 PHTF2Q8N3S3 785 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 DEFB118Q96PH6 123 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 PRPF18Q99633 342 aaKnown RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 MAGEH1Q9H213 219 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 EBF2Q9HAK2 575 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 POMPQ9Y244 141 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 GOLGA4Q13439 2230 aaKnown RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 QSER1Q2KHR3 1735 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 DLX3O60479 287 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 SEC22BO75396 215 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 CKBP12277 381 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 ACTR3P61158 418 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 RALGDSQ12967 914 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 MORN1Q5T089 497 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 RBM20Q5T481 1227 aaKnown RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 KCNN1Q92952 543 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 ZNF778Q96MU6 729 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 DHRS4Q9BTZ2 278 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 KIFC1Q9BW19 673 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 KLQ9UEF7 1012 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 NPEPPSL1A6NEC2 478 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 MOXD2PA6NHM9 499 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 PKMP14618 531 aaKnown RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 PBLDP30039 288 aaPredicted RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 ACVRL1P37023 503 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 ETV4P43268 484 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 ZNF284Q2VY69 593 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 PLEKHG4Q58EX7 1191 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 OTUD3Q5T2D3 398 aaPredicted RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 GPRIN3Q6ZVF9 776 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 NPAS4Q8IUM7 802 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 DCBLD1Q8N8Z6 715 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 OR13C4Q8NGS5 318 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 ARHGAP39Q9C0H5 1083 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 C6orf203Q9P0P8 240 aaPredicted RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 PSMD13Q9UNM6 376 aa13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 TNPO3Q9Y5L0 923 aaKnown RBP13.42□□□□□ -0.26
PCDHB9-201ENST00000316105 SLC38A8A6NNN8 435 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 UBXN8O00124 270 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 FFAR3O14843 346 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 GPR42O15529 346 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 PRKCGP05129 697 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 STEAP4Q687X5 459 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 TNIP2Q8NFZ5 429 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 BRSK1Q8TDC3 778 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 NDUFA13Q9P0J0 144 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 SCML2Q9UQR0 700 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 CAPN8A6NHC0 703 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 TMEM233B4DJY2 109 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 TBC1D4O60343 1298 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 ZNF623O75123 536 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 DGKAP23743 735 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 PDK3Q15120 406 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 CRY1Q16526 586 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 PGS1Q32NB8 556 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 FAM43BQ6ZT52 329 aaPredicted RBP13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 AMIGO2Q86SJ2 522 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 PGAM4Q8N0Y7 254 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 FBXO22Q8NEZ5 403 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 RNF145Q96MT1 663 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 MKS1Q9NXB0 559 aa13.41□□□□□ -0.26
PCDHB9-201ENST00000316105 ARL15Q9NXU5 204 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms