RNA–Protein interactions for RNA: ENST00000309996.6

SPTBN2-201, Transcript of spectrin beta, non-erythrocytic 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTBN2, Length 7,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN2-201ENST00000309996 CRY2Q49AN0 593 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 PERM1Q5SV97 790 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 PCDH20Q8N6Y1 951 aaKnown RBP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 KCNK4Q9NYG8 393 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 PCDHB3Q9Y5E6 796 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 BHMG1C9JSJ3 638 aaPredicted RBP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 BNIP1Q12981 228 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 SLC15A2Q16348 729 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 PIK3R6Q5UE93 754 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 CRTC3Q6UUV7 619 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 KCNT2Q6UVM3 1135 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 C7orf61Q8IZ16 206 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 DNASE1L2Q92874 299 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 TBCBQ99426 244 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 PFDN2Q9UHV9 154 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 FFAR3O14843 346 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 CCL16O15467 120 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 GPR42O15529 346 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 PPP3R1P63098 170 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 GRSF1Q12849 480 aaKnown RBP eCLIP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 PDCD4Q53EL6 469 aaKnown RBP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 TRIM40Q6P9F5 258 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 DEF8Q6ZN54 512 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 BEND7Q8N7W2 519 aaPredicted RBP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 DNERQ8NFT8 737 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 SLC2A14Q8TDB8 520 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 MTMR8Q96EF0 704 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 GAL3ST4Q96RP7 486 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 AIFM2Q9BRQ8 373 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 A0A075B6Q4 140 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 FGF10O15520 208 aaPredicted RBP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 LTA4HP09960 611 aaKnown RBP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 MSX1P28360 303 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 ZNF155Q12901 538 aaPredicted RBP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 LSM12Q3MHD2 195 aaKnown RBP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 FRRS1Q6ZNA5 592 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 TXNRD3Q86VQ6 643 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 BRSK1Q8TDC3 778 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 POPDC2Q9HBU9 364 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 ASTN2O75129 1339 aaPredicted RBP12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 SAMD9LQ8IVG5 1584 aa12.89□□□□□ -0.35
SPTBN2-201ENST00000309996 PEX12O00623 359 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 IL12AP29459 219 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 RPIAP49247 311 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SLC5A5Q92911 643 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 VAT1Q99536 393 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 AIF1LQ9BQI0 150 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 ZMYM2Q9UBW7 1377 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 HMGCRP04035 888 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 FNBP1LQ5T0N5 605 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 NKAPQ8N5F7 415 aaKnown RBP12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 PIH1D2Q8WWB5 315 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 TM6SF2Q9BZW4 377 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SPATC1LQ9H0A9 340 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 BPIFA1Q9NP55 256 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 LEF1Q9UJU2 399 aaPredicted RBP12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 MYO18AQ92614 2054 aaKnown RBP12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 IRGMA1A4Y4 181 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 PRH1P02810 166 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 FAAP100Q0VG06 881 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SLC30A6Q6NXT4 461 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 METTL7BQ6UX53 244 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 TATDN2Q93075 761 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 JCADQ9P266 1359 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 REREQ9P2R6 1566 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 PAPD7Q5XG87 772 aaKnown RBP12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 MOXD1Q6UVY6 613 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 CCDC80Q76M96 950 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SLC47A1Q96FL8 570 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 VCPIP1Q96JH7 1222 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 FTHL17Q9BXU8 183 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 EXD2Q9NVH0 621 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SAMHD1Q9Y3Z3 626 aaKnown RBP12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 HBS1LQ9Y450 684 aaKnown RBP12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 RB1P06400 928 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SPATA31D3P0C874 917 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 MTHFD1P11586 935 aaKnown RBP12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SLC25A25Q6KCM7 469 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SPATA31D4Q6ZUB0 917 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 CPT1CQ8TCG5 803 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 ZNF606Q8WXB4 792 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 PPP3R2Q96LZ3 170 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 ARHGEF33A8MVX0 844 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 CAPN14A8MX76 684 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SLC6A3Q01959 620 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 HKDC1Q2TB90 917 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 BICRALQ6AI39 1079 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 SULT1C3Q6IMI6 304 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 CHSY3Q70JA7 882 aa12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 NET1Q7Z628 596 aaPredicted RBP12.88□□□□□ -0.35
SPTBN2-201ENST00000309996 CCKBRP32239 447 aa12.87□□□□□ -0.35
SPTBN2-201ENST00000309996 ZNF135P52742 658 aaPredicted RBP12.87□□□□□ -0.35
SPTBN2-201ENST00000309996 DENND5AQ6IQ26 1287 aa12.87□□□□□ -0.35
SPTBN2-201ENST00000309996 SLC27A1Q6PCB7 646 aa12.87□□□□□ -0.35
SPTBN2-201ENST00000309996 ADGRG6Q86SQ4 1221 aa12.87□□□□□ -0.35
SPTBN2-201ENST00000309996 IFNL1Q8IU54 200 aa12.87□□□□□ -0.35
SPTBN2-201ENST00000309996 ARMC10Q8N2F6 343 aa12.87□□□□□ -0.35
SPTBN2-201ENST00000309996 TCEAL3Q969E4 200 aa12.87□□□□□ -0.35
SPTBN2-201ENST00000309996 MTFR1LQ9H019 292 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms