RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 SLC38A8A6NNN8 435 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 UBFD1O14562 309 aaKnown RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 LIN7AO14910 233 aaPredicted RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 LYNP07948 512 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 ATF6P18850 670 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 ME2P23368 584 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CST5P28325 142 aaPredicted RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CDKN1CP49918 316 aaPredicted RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 OXCT1P55809 520 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 NRG1Q02297 640 aaPredicted RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 TWF1Q12792 350 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 GPR17Q13304 367 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 ZNF549Q6P9A3 640 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 TRAF7Q6Q0C0 670 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 SETD3Q86TU7 594 aaPredicted RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 ICA1LQ8NDH6 482 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 TRPC4APQ8TEL6 797 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 GBP5Q96PP8 586 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 CCDC28BQ9BUN5 200 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 SEMA4BQ9NPR2 832 aaPredicted RBP11.56□□□□□ -0.56
PTPN2-201ENST00000309660 DTNAQ9Y4J8 743 aa11.56□□□□□ -0.56
PTPN2-201ENST00000309660 TCAF2A6NFQ2 919 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 GPR39O43194 453 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 PRAMEF11O60813 436 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 RNASEH1O60930 286 aaKnown RBP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 NDUFS3O75489 264 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 SRP72O76094 671 aaKnown RBP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 MAGEA11P43364 429 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 POLD2P49005 469 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 SLC11A2P49281 568 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 FAM45BPQ6NSW5 357 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 CCDC117Q8IWD4 279 aaPredicted RBP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 PHC3Q8NDX5 983 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 FAM45AQ8TCE6 357 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 TTPALQ9BTX7 342 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 VCX3BQ9H321 246 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 UBA2Q9UBT2 640 aaPredicted RBP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 SPO11Q9Y5K1 396 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 TET1Q8NFU7 2136 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 MROH6A6NGR9 719 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 TMEM189-UBE2V1I3L0A0 370 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 FGF1P05230 155 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 RHOCP08134 193 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 SELPP16109 830 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 HLA-DPA1P20036 260 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 ALDH1A3P47895 512 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 STX1BP61266 288 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 PAOXQ6QHF9 649 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 SCIMPQ6UWF3 145 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 KBTBD6Q86V97 674 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 PGAM4Q8N0Y7 254 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 PQLC1Q8N2U9 271 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 FBXO22Q8NEZ5 403 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 UBXN10Q96LJ8 280 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 SRRDQ9UH36 339 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 DNMT3LQ9UJW3 386 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 PRPF19Q9UMS4 504 aaKnown RBP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 IGLV3-10A0A075B6K4 115 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 ACSL4O60488 711 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 RPP40O75818 363 aaKnown RBP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 INHAP05111 366 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 SGSHP51688 502 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 YBEYP58557 167 aaPredicted RBP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 PSME3P61289 254 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 ECT2LQ008S8 904 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 RPS6KA2Q15349 733 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 MAP7D1Q3KQU3 841 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 HABP4Q5JVS0 413 aaKnown RBP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 PAQR3Q6TCH7 311 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 RAB44Q7Z6P3 723 aaPredicted RBP11.55□□□□□ -0.56
PTPN2-201ENST00000309660 SLC22A9Q8IVM8 553 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 OR6K2Q8NGY2 324 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 PPP2R3CQ969Q6 453 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 CDKN2AIPNLQ96HQ2 116 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 SEMA6AQ9H2E6 1030 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 GSTO2Q9H4Y5 243 aa11.55□□□□□ -0.56
PTPN2-201ENST00000309660 LOC285095A0A1B0GVY8 99 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 E7ENX8 843 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 H3BMM5 538 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 NR5A2O00482 541 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 DNAJA2O60884 412 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 VNN2O95498 520 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 GALTP07902 379 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 CORO1AP31146 461 aaKnown RBP11.54□□□□□ -0.56
PTPN2-201ENST00000309660 ALDH7A1P49419 539 aaKnown RBP11.54□□□□□ -0.56
PTPN2-201ENST00000309660 POLE2P56282 527 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 PLD1Q13393 1074 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 MSLNQ13421 630 aaPredicted RBP11.54□□□□□ -0.56
PTPN2-201ENST00000309660 OR4D1Q15615 310 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 ZRANB3Q5FWF4 1079 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 PDSS2Q86YH6 399 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 BRSK1Q8TDC3 778 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 BCL7CQ8WUZ0 217 aaPredicted RBP11.54□□□□□ -0.56
PTPN2-201ENST00000309660 TUBGCP3Q96CW5 907 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 C3orf30Q96M34 536 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 PIDD1Q9HB75 910 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 SCUBE2Q9NQ36 999 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 RNF112Q9ULX5 631 aa11.54□□□□□ -0.56
PTPN2-201ENST00000309660 TIMM22Q9Y584 194 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms