RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 PCDHGA11Q9Y5H2 935 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 GPR45Q9Y5Y3 372 aa5.47□□□□□ -1.53
VPS50-202ENST00000305866 TRBV5-3A0A0A0MS03 114 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 A0A1W2PPW3 197 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 E2F8A0AVK6 867 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 A8MT66 165 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 H7C0C1 242 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 TNFRSF10BO14763 440 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 KPNA6O60684 536 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 POLBP06746 335 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 PGK2P07205 417 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 PTPN2P17706 415 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 HOXD12P35452 270 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 ATP5OP48047 213 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 PGFP49763 221 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 TAF6P49848 677 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 HNRNPFP52597 415 aaKnown RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 FOXA1P55317 472 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SH3BGRP55822 239 aaPredicted RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 NAA20P61599 178 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 CCNA1P78396 465 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SNX17Q15036 470 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 MOGQ16653 247 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.46□□□□□ -1.54
VPS50-202ENST00000305866 UNC50Q53HI1 259 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 BRMS1LQ5PSV4 323 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 KDELC1Q6UW63 502 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 DLEU7Q6UYE1 221 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 ARHGAP36Q6ZRI8 547 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 PTAR1Q7Z6K3 402 aaPredicted RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 STRA8Q7Z7C7 330 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 CADM3Q8N126 398 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 MUL1Q969V5 352 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 ZNF566Q969W8 418 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 PTERQ96BW5 349 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 RHBDF1Q96CC6 855 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 NXNL1Q96CM4 212 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 YIPF6Q96EC8 236 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 CEP295NLQ96MC4 621 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SLC39A3Q9BRY0 314 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 BRINP2Q9C0B6 783 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 AMBRA1Q9C0C7 1298 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SEMA6AQ9H2E6 1030 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 RHOJQ9H4E5 214 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 ZFYVE28Q9HCC9 887 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 RHBDL2Q9NX52 303 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SLC2A6Q9UGQ3 507 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 TMEFF2Q9UIK5 374 aaPredicted RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 GRXCR2A6NFK2 248 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 AIM2O14862 343 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 AQP9O43315 295 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 B4GAT1O43505 415 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 IGLV3-27P01718 113 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 ALPLP05186 524 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 MYL3P08590 195 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SMIM10L2AP0DMW4 78 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SMIM10L2BP0DMW5 78 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 RFC2P35250 354 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 TGFBR2P37173 567 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 LHX1P48742 406 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SLC5A3P53794 718 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SH3BP2P78314 561 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 MERTKQ12866 999 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SPCS2Q15005 226 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 INAVAQ3KP66 663 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 HEATR6Q6AI08 1181 aaKnown RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 RANBP10Q6VN20 620 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 LINC00299Q6ZSB3 139 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 LINC00523Q86TU6 105 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 ACOT1Q86TX2 421 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 ISCA2Q86U28 154 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 HEXDCQ8WVB3 486 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 KCTD4Q8WVF5 259 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 CDKL2Q92772 493 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 EGLN2Q96KS0 407 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 RPL10LQ96L21 214 aaKnown RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 CRTAC1Q9NQ79 661 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 FBXO8Q9NRD0 319 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SDR39U1Q9NRG7 319 aaPredicted RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 GIN1Q9NXP7 522 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SCHIP1Q9P0W5 487 aaPredicted RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 TRAF6Q9Y4K3 522 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 DNAJC15Q9Y5T4 150 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 CPQQ9Y646 472 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 A0A087X1B8 175 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 CXorf51AA0A1B0GTR3 108 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 NEMP2A6NFY4 417 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 AQP12BA6NM10 295 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 SLC7A4O43246 635 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 CSPG5O95196 566 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 MBL2P11226 248 aaPredicted RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 GFAPP14136 432 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 CRHBPP24387 322 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 YWHAQP27348 245 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 HALP42357 657 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 LEPRP48357 1165 aaKnown RBP5.46□□□□□ -1.54
VPS50-202ENST00000305866 TMBIM6P55061 237 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 MPP1Q00013 466 aa5.46□□□□□ -1.54
VPS50-202ENST00000305866 PRKAA1Q13131 559 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms