RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 TBPL2Q6SJ96 375 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 CRTC3Q6UUV7 619 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 PLEKHG7Q6ZR37 379 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 RPS27LQ71UM5 84 aaKnown RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 LINC00523Q86TU6 105 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 CCDC126Q96EE4 140 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 UBXN10Q96LJ8 280 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 SIAEQ9HAT2 523 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 CYP4F12Q9HCS2 524 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 IGSF5Q9NSI5 407 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 POU2F3Q9UKI9 436 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 ZNF214Q9UL59 606 aaPredicted RBP13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 NME7Q9Y5B8 376 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 A0A0G2JMZ2 1700 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 LRRC37A2A6NM11 1700 aa13.53□□□□□ -0.24
RPUSD4-201ENST00000298317 INPP4BO15327 924 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 UGT2B11O75310 529 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 LDLRP01130 860 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 OAZ1P54368 228 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 MBTD1Q05BQ5 628 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 FOXM1Q08050 763 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 E2F2Q14209 437 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 SF3B4Q15427 424 aaKnown RBP eCLIP13.52□□□□□ -0.243e-6■■■■■ 33.9
RPUSD4-201ENST00000298317 PUS10Q3MIT2 529 aaKnown RBP13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 UGT3A2Q3SY77 523 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 FAM160B1Q5W0V3 765 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 PTRH1Q86Y79 214 aaKnown RBP13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 DENND6AQ8IWF6 608 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 MFSD4AQ8N468 514 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 TRIB2Q92519 343 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 ZNF668Q96K58 619 aaPredicted RBP13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 SLC30A3Q99726 388 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 CEP44Q9C0F1 390 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 TMPRSS4Q9NRS4 437 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 MTRRQ9UBK8 725 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 ANAPC2Q9UJX6 822 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 PCDHA9Q9Y5H5 950 aa13.52□□□□□ -0.24
RPUSD4-201ENST00000298317 MT-CO1P00395 513 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 UMPSP11172 480 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 MTHFD1P11586 935 aaKnown RBP13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 HTR1BP28222 390 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 NOS2P35228 1153 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 RPL34P49207 117 aaKnown RBP13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 TKTL1P51854 596 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 TAS2R39P59534 338 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 RBP5P82980 135 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 CAPRIN1Q14444 709 aaKnown RBP13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 TMEM132DQ14C87 1099 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 STXBP2Q15833 593 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 CTF1Q16619 201 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 OTUD1Q5VV17 481 aaPredicted RBP13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 FAM219BQ5XKK7 198 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 R3HCC1LQ7Z5L2 792 aaKnown RBP13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 SNX29P2Q8IUI4 249 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 C7orf31Q8N865 590 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 ZFP90Q8TF47 636 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 OSCP1Q8WVF1 389 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 SGCDQ92629 289 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 MRPL45Q9BRJ2 306 aaKnown RBP13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 RETREG1Q9H6L5 497 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 MINDY3Q9H8M7 445 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 IFT52Q9Y366 437 aa13.52□□□□□ -0.25
RPUSD4-201ENST00000298317 ATP6AP2A0A1C7CYW4 349 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 A0A1W2PQ67 120 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 ZBTB42B2RXF5 422 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 UBFD1O14562 309 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 ATP6AP2O75787 350 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 HTR1AP08908 422 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 TPTEP56180 551 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 CDH17Q12864 832 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 CTBP1Q13363 440 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 DNASE1L3Q13609 305 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 MAPRE1Q15691 268 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 PGS1Q32NB8 556 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 SLC10A6Q3KNW5 377 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 VPS26BQ4G0F5 336 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 PYCR3Q53H96 274 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 CLEC6AQ6EIG7 209 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 DSG4Q86SJ6 1040 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 ITIH5Q86UX2 942 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 SLC22A17Q8WUG5 538 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 MUL1Q969V5 352 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 LRRC58Q96CX6 371 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 C19orf60Q96EN9 201 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 C3orf30Q96M34 536 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 ING2Q9H160 280 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 GSTO2Q9H4Y5 243 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 THG1LQ9NWX6 298 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 ZNF219Q9P2Y4 722 aaPredicted RBP13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 TMA7Q9Y2S6 64 aaKnown RBP13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 RLFQ13129 1914 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 FNDC1Q4ZHG4 1894 aaPredicted RBP13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 ANGPT2O15123 496 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 GJB1P08034 283 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 IQCF3P0C7M6 154 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 LCP1P13796 627 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 NFKB1P19838 968 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 MATKP42679 507 aa13.51□□□□□ -0.25
RPUSD4-201ENST00000298317 SULT1E1P49888 294 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms