RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 SIRPGQ9P1W8 387 aa15.57■□□□□ 0.08
LSM6-201ENST00000296581 CD3EAPO15446 510 aaKnown RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 PIGNO95427 931 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 ADH1CP00326 375 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 PROCP04070 461 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 BPGMP07738 259 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 CISD3P0C7P0 127 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 ADH5P11766 374 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 OGNP20774 298 aaKnown RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 BMP8BP34820 402 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 ABL2P42684 1182 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 POU4F1Q01851 419 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 MYLK3Q32MK0 819 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 ACCSLQ4AC99 568 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 TMEM215Q68D42 235 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 CAPRIN2Q6IMN6 1127 aaKnown RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 ANKRD54Q6NXT1 300 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 C16orf46Q6P387 395 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 FAM47EQ6ZV65 393 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 TRIM74Q86UV6 250 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 TRIM73Q86UV7 250 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 LCA5Q86VQ0 697 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 SLC41A1Q8IVJ1 513 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 OR4L1Q8NH43 312 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 SCG3Q8WXD2 468 aaKnown RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 TIFAQ96CG3 184 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 ASIC4Q96FT7 647 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 SLCO1B3Q9NPD5 702 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 TMEM216Q9P0N5 145 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 CAMSAP3Q9P1Y5 1249 aaPredicted RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 EPHB1P54762 984 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 IFT88Q13099 833 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 TCEAL5Q5H9L2 206 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 COL13A1Q5TAT6 717 aaPredicted RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 TRIM68Q6AZZ1 485 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 MRNIPQ6NTE8 343 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 AFTPHQ6ULP2 937 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 GET4Q7L5D6 327 aaPredicted RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 TRIM42Q8IWZ5 723 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 PLPP6Q8IY26 295 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 PLD6Q8N2A8 252 aaKnown RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 NAT16Q8N8M0 369 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 CCDC197Q8NCU1 140 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 CPEB1Q9BZB8 566 aaKnown RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 CATSPERZQ9NTU4 200 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 SLCO3A1Q9UIG8 710 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 PHTF1Q9UMS5 762 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 STARD13Q9Y3M8 1113 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 ZNF711Q9Y462 761 aa15.56■□□□□ 0.08
LSM6-201ENST00000296581 PRRC2BQ5JSZ5 2229 aaKnown RBP15.56■□□□□ 0.08
LSM6-201ENST00000296581 H7C0S8 307 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 TRIM24O15164 1050 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 LINC01565O15544 149 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 SLC35E2BP0CK96 405 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 COL6A2P12110 1019 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 POLR2EP19388 210 aaKnown RBP15.55■□□□□ 0.08
LSM6-201ENST00000296581 BGNP21810 368 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 FCARP24071 287 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 CRABP2P29373 138 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 SERPINA4P29622 427 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 GKP32189 559 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 GMPRP36959 345 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 VASPP50552 380 aaPredicted RBP15.55■□□□□ 0.08
LSM6-201ENST00000296581 RAB10P61026 200 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 IRF9Q00978 393 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 GEN1Q17RS7 908 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 TYSND1Q2T9J0 566 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 CCDC153Q494R4 210 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 CARD16Q5EG05 197 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 RAB3IL1Q8TBN0 382 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 ELMO2Q96JJ3 720 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 OMDQ99983 421 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 APOL5Q9BWW9 433 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 C1QTNF1Q9BXJ1 281 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 POLR3BQ9NW08 1133 aaPredicted RBP15.55■□□□□ 0.08
LSM6-201ENST00000296581 CDH22Q9UJ99 828 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 TLK1Q9UKI8 766 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 ERVW-1Q9UQF0 538 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 RANBP2P49792 3224 aaKnown RBP15.55■□□□□ 0.08
LSM6-201ENST00000296581 A0A0J9YYE9 177 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 PHGDHO43175 533 aaKnown RBP15.55■□□□□ 0.08
LSM6-201ENST00000296581 IL1BP01584 269 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 TRBC1P01850 177 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 NEFHP12036 1026 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 STMN1P16949 149 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 TAS2R39P59534 338 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 SEMA3AQ14563 771 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 ITIH4Q14624 930 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 PTPRRQ15256 657 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 TAF1BQ53T94 588 aaPredicted RBP15.55■□□□□ 0.08
LSM6-201ENST00000296581 THEMIS2Q5TEJ8 643 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 C6orf89Q6UWU4 347 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 LDB1Q86U70 411 aaPredicted RBP15.55■□□□□ 0.08
LSM6-201ENST00000296581 CEP97Q8IW35 865 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 RYBPQ8N488 228 aaPredicted RBP15.55■□□□□ 0.08
LSM6-201ENST00000296581 WFIKKN2Q8TEU8 576 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 ECHDC3Q96DC8 303 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 MRGPRX3Q96LB0 322 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 C19orf43Q9BQ61 176 aa15.55■□□□□ 0.08
LSM6-201ENST00000296581 MECRQ9BV79 373 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms