RNA–Protein interactions for RNA: ENST00000293880.9

SSRP1-202, Transcript of structure specific recognition protein 1, humanhuman

TSL 2

Gene SSRP1, Length 6,296 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-202ENST00000293880 ZNF615Q8N8J6 731 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 EZH1Q92800 747 aaPredicted RBP16.15■□□□□ 0.18
SSRP1-202ENST00000293880 SPATC1LQ9H0A9 340 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 ASTN1O14525 1302 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 ICAM3P32942 547 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 TRIM40Q6P9F5 258 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 OR52J3Q8NH60 311 aa16.15■□□□□ 0.18
SSRP1-202ENST00000293880 NDRG1Q92597 394 aaKnown RBP16.15■□□□□ 0.18
SSRP1-202ENST00000293880 RFXANKO14593 260 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ZW10O43264 779 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 HOXA2O43364 376 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 TPST2O60704 377 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 SCN2BO60939 215 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ATP5BP06576 529 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 AMD1P17707 334 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ADORA2AP29274 412 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 MXD1Q05195 221 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ITGA7Q13683 1181 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 IL17AQ16552 155 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 RUNDC3AQ59EK9 446 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ASB12Q8WXK4 309 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 PDP1Q9P0J1 537 aaPredicted RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 MARCH2Q9P0N8 246 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 C15orf38-AP3S2A0A0A6YYH1 394 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 A0A0G2JPF8 293 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 HNRNPCL3B7ZW38 293 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 SGTAO43765 313 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 RBMXL2O75526 392 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 CAPN15O75808 1086 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 PAEPP09466 180 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 HNRNPCL4P0DMR1 293 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 SLC7A2P52569 658 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 CDH13P55290 713 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 SPDYCQ5MJ68 293 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ARPINQ7Z6K5 226 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 RASAL3Q86YV0 1011 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 GALNT6Q8NCL4 622 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 RP9Q8TA86 221 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ITCHQ96J02 903 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ZDHHC15Q96MV8 337 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 CIB1Q99828 191 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 MCMBPQ9BTE3 642 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 OSBPL11Q9BXB4 747 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 NCKAP1Q9Y2A7 1128 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 FRMPD4Q14CM0 1322 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 MAPTP10636 758 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 YAP1P46937 504 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 IST1P53990 364 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 GCNT1Q02742 428 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 PDK4Q16654 411 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 CSGALNACT1Q8TDX6 532 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ELOVL4Q9GZR5 314 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 CEP170BQ9Y4F5 1589 aaPredicted RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 DDX3YO15523 660 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 SNAP91O60641 907 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 TNFRSF8P28908 595 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 MC4RP32245 332 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 BTG3Q14201 252 aaPredicted RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 NT5DC1Q5TFE4 455 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ANKS1BQ7Z6G8 1248 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 MEIOBQ8N635 442 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 EPS8L1Q8TE68 723 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ALG2Q9H553 416 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 RGS17Q9UGC6 210 aaPredicted RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 CARD8Q9Y2G2 431 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 RPL5P46777 297 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 RIPK1Q13546 671 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 CERCAMQ5T4B2 595 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 PIK3R6Q5UE93 754 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 CFAP52Q8N1V2 620 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 AGBL3Q8NEM8 1001 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 GAD1Q99259 594 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 ACAT2Q9BWD1 397 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 MIR1-1HGQ9H1L0 117 aa16.14■□□□□ 0.17
SSRP1-202ENST00000293880 MRPL17Q9NRX2 175 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 TNPO3Q9Y5L0 923 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 OAS3Q9Y6K5 1087 aaKnown RBP16.14■□□□□ 0.17
SSRP1-202ENST00000293880 CAPN8A6NHC0 703 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 CCRL2O00421 344 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 PGK1P00558 417 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 SERPINA3P01011 423 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 SPATA31D3P0C874 917 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 RPL9P32969 192 aaKnown RBP16.13■□□□□ 0.17
SSRP1-202ENST00000293880 SPATA31D4Q6ZUB0 917 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 ATP6V1C2Q8NEY4 427 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 SETD6Q8TBK2 473 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 GBA2Q9HCG7 927 aaPredicted RBP16.13■□□□□ 0.17
SSRP1-202ENST00000293880 C11orf16Q9NQ32 467 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 A0A0J9YYE9 177 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 SIGLEC16A6NMB1 481 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 MLYCDO95822 493 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 ERBB2P04626 1255 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 CAMK1Q14012 370 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 IRAK1BP1Q5VVH5 260 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 ZFPM1Q8IX07 1006 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 NAT16Q8N8M0 369 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 PIK3C3Q8NEB9 887 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 SENP8Q96LD8 212 aa16.13■□□□□ 0.17
SSRP1-202ENST00000293880 CHIAQ9BZP6 476 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms