RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 GPR42O15529 346 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 DHX15O43143 795 aaKnown RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 ADH1CP00326 375 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 STX4Q12846 297 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 TAF10Q12962 218 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 TAB1Q15750 504 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 NAIF1Q69YI7 327 aaPredicted RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 SERPINA13PQ6UXR4 307 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 CLNKQ7Z7G1 428 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 OFCC1Q8IZS5 231 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 DQX1Q8TE96 717 aaKnown RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 C2orf15Q8WU43 125 aaKnown RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 NACC2Q96BF6 587 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 FZD8Q9H461 694 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 PRDM8Q9NQV8 689 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 PCDHB9Q9Y5E1 797 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 COMMD3-BMI1R4GMX3 469 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 ZMPSTE24O75844 475 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 CCNDBP1O95273 360 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 LINC00032P0C843 101 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 GBE1Q04446 702 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 SLC20A2Q08357 652 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 PMF1Q6P1K2 205 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 OR52L1Q8NGH7 329 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 DCUN1D5Q9BTE7 237 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 PSMD13Q9UNM6 376 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 TCAF1Q9Y4C2 921 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 PRR5-ARHGAP8B1AHC4 643 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 GSC2O15499 205 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 ASNA1O43681 348 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 FAM163BP0C2L3 166 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 UNGP13051 313 aaPredicted RBP12.8□□□□□ -0.36
PTCD1-201ENST00000292478 CTNNB1P35222 781 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 SCNN1AP37088 669 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 COPZ1P61923 177 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 ARHGAP8P85298 464 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 CACNG1Q06432 222 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 ACAP2Q15057 778 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 CNTD1Q8N815 330 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 WDR48Q8TAF3 677 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 ARHGEF4Q9NR80 690 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 NUDT4Q9NZJ9 180 aa12.8□□□□□ -0.36
PTCD1-201ENST00000292478 AKAP12Q02952 1782 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 BTBD19C9JJ37 291 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 CST1P01037 141 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 CTSEP14091 401 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 FGFR3P22607 806 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 SLC5A3P53794 718 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 CDH4P55283 916 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 BNIP1Q12981 228 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 SDHAF4Q5VUM1 108 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 MOB2Q70IA6 237 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 BNIPLQ7Z465 357 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 SLC38A2Q96QD8 506 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 MAGEH1Q9H213 219 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 ZFYVE1Q9HBF4 777 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 ZFP14Q9HCL3 533 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 SLC9A8Q9Y2E8 581 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 RFXANKO14593 260 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 DNAJA2O60884 412 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 SERPINB7O75635 380 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 TACR2P21452 398 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 OR1D2P34982 312 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 RGS1Q08116 209 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 DEFB115Q30KQ5 88 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 MACC1Q6ZN28 852 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 ASZ1Q8WWH4 475 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 AHCYL2Q96HN2 611 aaKnown RBP12.79□□□□□ -0.36
PTCD1-201ENST00000292478 KLHL5Q96PQ7 755 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 PANX1Q96RD7 426 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 ADI1Q9BV57 179 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 CAB39LQ9H9S4 337 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 ARL8BQ9NVJ2 186 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 DDX18Q9NVP1 670 aaKnown RBP12.79□□□□□ -0.36
PTCD1-201ENST00000292478 A0A0G2JLL6 359 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-201ENST00000292478 PBX3P40426 434 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 TARBP2Q15633 366 aaKnown RBP12.79□□□□□ -0.36
PTCD1-201ENST00000292478 QPCTQ16769 361 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 LLGL2Q6P1M3 1020 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 ERICH5Q6P6B1 374 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 PRRT2Q7Z6L0 340 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-201ENST00000292478 BEND7Q8N7W2 519 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-201ENST00000292478 CXorf40BQ96DE9 158 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 REXO5Q96IC2 774 aaKnown RBP12.79□□□□□ -0.36
PTCD1-201ENST00000292478 OR52E6Q96RD3 313 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 GMIPQ9P107 970 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 SALL4Q9UJQ4 1053 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 PADI3Q9ULW8 664 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.79□□□□□ -0.36
PTCD1-201ENST00000292478 TCRBV7S2A1N4TA0A589 114 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 SOWAHBA6NEL2 793 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 CTPS1P17812 591 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 ZC3H7AQ8IWR0 971 aaKnown RBP12.79□□□□□ -0.36
PTCD1-201ENST00000292478 AMER2Q8N7J2 671 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 KBTBD8Q8NFY9 601 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 ZNF607Q96SK3 696 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 IGSF9Q9P2J2 1179 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 IKZF3Q9UKT9 509 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 FZD10Q9ULW2 581 aa12.79□□□□□ -0.36
PTCD1-201ENST00000292478 SAMD4AQ9UPU9 718 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms