RNA–Protein interactions for RNA: ENST00000291722.11

CACFD1-201, Transcript of calcium channel flower domain containing 1, humanhuman

TSL 2 BASIC

Gene CACFD1, Length 2,688 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACFD1-201ENST00000291722 UBFD1O14562 309 aaKnown RBP16.3■□□□□ 0.2
CACFD1-201ENST00000291722 SCAMP3O14828 347 aaKnown RBP16.3■□□□□ 0.2
CACFD1-201ENST00000291722 NPHS1O60500 1241 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 FKBP6O75344 327 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 LYNP07948 512 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 THRAP10827 490 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 RAG1P15918 1043 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 SGSHP51688 502 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 CLCN5P51795 746 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 THOP1P52888 689 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 PRKAA2P54646 552 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 PTPRRQ15256 657 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 LHX8Q68G74 356 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 CLEC6AQ6EIG7 209 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 KIAA0408Q6ZU52 694 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 RYBPQ8N488 228 aaPredicted RBP16.3■□□□□ 0.2
CACFD1-201ENST00000291722 HMGCLL1Q8TB92 370 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 UBXN10Q96LJ8 280 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 ECSITQ9BQ95 431 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 FNIP2Q9P278 1114 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 SRRDQ9UH36 339 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 PCDHB7Q9Y5E2 793 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 SCN5AQ14524 2016 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 ANKRD12Q6UB98 2062 aa16.3■□□□□ 0.2
CACFD1-201ENST00000291722 LAMA3Q16787 3333 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 CCDC162PA2VCL2 907 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 H3BNX3 289 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 PPP6CO00743 305 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 XRCC1P18887 633 aaPredicted RBP16.29■□□□□ 0.2
CACFD1-201ENST00000291722 PEX2P28328 305 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 RPS24P62847 133 aaKnown RBP16.29■□□□□ 0.2
CACFD1-201ENST00000291722 GPR17Q13304 367 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 SFT2D3Q587I9 215 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 DHDDSQ86SQ9 333 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 CPSF7Q8N684 471 aaKnown RBP16.29■□□□□ 0.2
CACFD1-201ENST00000291722 SNRNP27Q8WVK2 155 aaKnown RBP16.29■□□□□ 0.2
CACFD1-201ENST00000291722 CYP2S1Q96SQ9 504 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 MFSD1Q9H3U5 465 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.29■□□□□ 0.2
CACFD1-201ENST00000291722 SLC7A4O43246 635 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 PRAMEF11O60813 436 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 IPO13O94829 963 aaKnown RBP16.29■□□□□ 0.2
CACFD1-201ENST00000291722 MYCP01106 439 aaPredicted RBP16.29■□□□□ 0.2
CACFD1-201ENST00000291722 ALDH2P05091 517 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 PHEXP78562 749 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 ZNF235Q14590 738 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 AGAP9Q5VTM2 703 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 CUZD1Q86UP6 607 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 FAM156AQ8NDB6 213 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 CALML6Q8TD86 181 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 PDCD6IPQ8WUM4 868 aaKnown RBP16.29■□□□□ 0.2
CACFD1-201ENST00000291722 PDFQ9HBH1 243 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 ZBTB26Q9HCK0 441 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 VTI1BQ9UEU0 232 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 TMEM98Q9Y2Y6 226 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 SH3GLB1Q9Y371 365 aa16.29■□□□□ 0.2
CACFD1-201ENST00000291722 ZFP37Q9Y6Q3 630 aaPredicted RBP16.29■□□□□ 0.2
CACFD1-201ENST00000291722 OR6C75A6NL08 312 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 SLC38A8A6NNN8 435 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 HOXD9P28356 352 aaPredicted RBP16.28■□□□□ 0.2
CACFD1-201ENST00000291722 DNAJB13P59910 316 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 CEACAM7Q14002 265 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 FBXO48Q5FWF7 155 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 PIWIL4Q7Z3Z4 852 aaKnown RBP16.28■□□□□ 0.2
CACFD1-201ENST00000291722 ISCA2Q86U28 154 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 KYQ8NBH2 561 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 RP9Q8TA86 221 aaKnown RBP16.28■□□□□ 0.2
CACFD1-201ENST00000291722 SPPL2BQ8TCT7 592 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 WBP2Q969T9 261 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 CENPKQ9BS16 269 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 SPON2Q9BUD6 331 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 POLR1EQ9GZS1 481 aaKnown RBP16.28■□□□□ 0.2
CACFD1-201ENST00000291722 EBF3Q9H4W6 596 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 CAMSAP3Q9P1Y5 1249 aaPredicted RBP16.28■□□□□ 0.2
CACFD1-201ENST00000291722 SPO11Q9Y5K1 396 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 CHD5Q8TDI0 1954 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 ATP6AP2A0A1C7CYW4 349 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 TBC1D4O60343 1298 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 ATP6AP2O75787 350 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 PAPSS2O95340 614 aaPredicted RBP16.28■□□□□ 0.2
CACFD1-201ENST00000291722 WISP3O95389 354 aaPredicted RBP16.28■□□□□ 0.2
CACFD1-201ENST00000291722 DNAJB1P25685 340 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 CDH13P55290 713 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 HPCAP84074 193 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 MS4A2Q01362 244 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 AAGABQ6PD74 315 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 MAELQ96JY0 434 aaKnown RBP16.28■□□□□ 0.2
CACFD1-201ENST00000291722 CCDC28BQ9BUN5 200 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 GSTO2Q9H4Y5 243 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 GKN1Q9NS71 199 aa16.28■□□□□ 0.2
CACFD1-201ENST00000291722 TCAF2A6NFQ2 919 aa16.27■□□□□ 0.2
CACFD1-201ENST00000291722 TCN1P20061 433 aaPredicted RBP16.27■□□□□ 0.2
CACFD1-201ENST00000291722 DSG1Q02413 1049 aa16.27■□□□□ 0.2
CACFD1-201ENST00000291722 PARP15Q460N3 678 aa16.27■□□□□ 0.2
CACFD1-201ENST00000291722 ZNF554Q86TJ5 538 aa16.27■□□□□ 0.2
CACFD1-201ENST00000291722 FATE1Q969F0 183 aa16.27■□□□□ 0.2
CACFD1-201ENST00000291722 TMA16Q96EY4 203 aaKnown RBP16.27■□□□□ 0.2
CACFD1-201ENST00000291722 TUBGCP5Q96RT8 1024 aa16.27■□□□□ 0.2
CACFD1-201ENST00000291722 ZBED2Q9BTP6 218 aa16.27■□□□□ 0.2
CACFD1-201ENST00000291722 OLA1Q9NTK5 396 aaKnown RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms