RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 DUSP28Q4G0W2 176 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 PABPC1LQ4VXU2 614 aaKnown RBP13.41□□□□□ -0.26
SCAF4-201ENST00000286835 HECTD2Q5U5R9 776 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 ZNF555Q8NEP9 628 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 SKA2Q8WVK7 121 aaPredicted RBP13.41□□□□□ -0.26
SCAF4-201ENST00000286835 PPM1MQ96MI6 270 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 GAD1Q99259 594 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 COQ6Q9Y2Z9 468 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 GOLGA4Q13439 2230 aaKnown RBP13.41□□□□□ -0.26
SCAF4-201ENST00000286835 IGKV6-21A0A0C4DH24 114 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 E5RI56 91 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 TBC1D4O60343 1298 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 LBPP18428 481 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 PCYT1AP49585 367 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 LILRA4P59901 499 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 POU4F1Q01851 419 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 CHRNB3Q05901 458 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 ZNF235Q14590 738 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 AASDHQ4L235 1098 aaPredicted RBP13.41□□□□□ -0.26
SCAF4-201ENST00000286835 ZNF789Q5FWF6 425 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 CLEC20AQ6ZU45 233 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 FRA10AC1Q70Z53 315 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 ADCK1Q86TW2 530 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 OSTM1Q86WC4 334 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 FAM110BQ8TC76 370 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 FNDC8Q8TC99 324 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 GLMNQ92990 594 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 TMEM74Q96NL1 305 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 AKTIPQ9H8T0 292 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 UBXN8O00124 270 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 PQBP1O60828 265 aaKnown RBP13.41□□□□□ -0.26
SCAF4-201ENST00000286835 NDUFS3O75489 264 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 PRKAR2AP13861 404 aaKnown RBP13.41□□□□□ -0.26
SCAF4-201ENST00000286835 RAD23AP54725 363 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 HERC3Q15034 1050 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 FGD3Q5JSP0 725 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 CLYBLQ8N0X4 340 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 TMEM102Q8N9M5 508 aaPredicted RBP13.41□□□□□ -0.26
SCAF4-201ENST00000286835 PCSK9Q8NBP7 692 aaKnown RBP13.41□□□□□ -0.26
SCAF4-201ENST00000286835 BORCS5Q969J3 196 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 LRCH3Q96II8 777 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 SNX27Q96L92 541 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 VRTNQ9H8Y1 702 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 MRGBPQ9NV56 204 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 BAG5Q9UL15 447 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 U3KQV3 271 aa13.41□□□□□ -0.26
SCAF4-201ENST00000286835 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 TMX2-CTNND1H3BSU7 103 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 BNIP3LO60238 219 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 SYNCRIPO60506 623 aaKnown RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 ZNF26P17031 533 aaPredicted RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 ALDH4A1P30038 563 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 NOGQ13253 232 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 ATP6AP1LQ52LC2 224 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 FBXO39Q8N4B4 442 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 SMYD1Q8NB12 490 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 LPPQ93052 612 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 NPY6RQ99463 290 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 BDH2Q9BUT1 245 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 ENTPD7Q9NQZ7 604 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 VPS45Q9NRW7 570 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 COL2A1P02458 1487 aaPredicted RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 MYO1GB0I1T2 1018 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 AZIN1O14977 448 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 COL6A2P12110 1019 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 SERPINH1P50454 418 aaKnown RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 HK2P52789 917 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 PAFAH1B3Q15102 231 aaKnown RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 CCL14Q16627 93 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 RGS21Q2M5E4 152 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 TAS2R42Q7RTR8 314 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 GIPC2Q8TF65 315 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 TWIST2Q8WVJ9 160 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 COX4I2Q96KJ9 171 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 HSFX1Q9UBD0 423 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 TCAF1Q9Y4C2 921 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 NPHS1O60500 1241 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 GLP2RO95838 553 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 FMO4P31512 558 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 RPS9P46781 194 aaKnown RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 GSSP48637 474 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 ZBED5Q49AG3 693 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 AARS2Q5JTZ9 985 aaKnown RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 MARC1Q5VT66 337 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 DEFB128Q7Z7B8 93 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 LSMEM2Q8N112 164 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 ZNF513Q8N8E2 541 aaPredicted RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 EPB41L1Q9H4G0 881 aa13.4□□□□□ -0.26
SCAF4-201ENST00000286835 SMPD3Q9NY59 655 aaPredicted RBP13.4□□□□□ -0.26
SCAF4-201ENST00000286835 GPR182O15218 404 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 ESRRBO95718 433 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 THP07101 528 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 CDH3P22223 829 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 LIPEQ05469 1076 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 GTF2H3Q13889 308 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 SPIDRQ14159 915 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 PTPRCAPQ14761 206 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 KIAA1217Q5T5P2 1943 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 NRCAMQ92823 1304 aa13.39□□□□□ -0.27
SCAF4-201ENST00000286835 FAM162AQ96A26 154 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms