RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 PDHA1P08559 390 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 LPOP22079 712 aaPredicted RBP15.38■□□□□ 0.05
COPS3-201ENST00000268717 MPP1Q00013 466 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 BCL2L1Q07817 233 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 USP10Q14694 798 aaKnown RBP15.38■□□□□ 0.05
COPS3-201ENST00000268717 SMAD1Q15797 465 aaKnown RBP15.38■□□□□ 0.05
COPS3-201ENST00000268717 ATXN7L2Q5T6C5 722 aaPredicted RBP15.38■□□□□ 0.05
COPS3-201ENST00000268717 N4BP2L1Q5TBK1 243 aaPredicted RBP15.38■□□□□ 0.05
COPS3-201ENST00000268717 ATG16L1Q676U5 607 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 FOXR1Q6PIV2 292 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 C6orf89Q6UWU4 347 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 MTSS1LQ765P7 747 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 YTHDF3Q7Z739 585 aaKnown RBP15.38■□□□□ 0.05
COPS3-201ENST00000268717 CMC1Q7Z7K0 106 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 SLC44A3Q8N4M1 653 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 ARMC2Q8NEN0 867 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 ST13P5Q8NFI4 369 aaPredicted RBP15.38■□□□□ 0.05
COPS3-201ENST00000268717 OR6P1Q8NGX9 317 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 SMARCD2Q92925 531 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 LINC00597Q9H2U6 94 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 TLK1Q9UKI8 766 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 EMCNQ9ULC0 261 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 SLC39A10Q9ULF5 831 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 PHTF1Q9UMS5 762 aa15.38■□□□□ 0.05
COPS3-201ENST00000268717 A0A1W2PQ67 120 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 NARSO43776 548 aaKnown RBP15.37■□□□□ 0.05
COPS3-201ENST00000268717 ADH1CP00326 375 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 PROCP04070 461 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 STMN1P16949 149 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 SERPINA4P29622 427 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 RAB10P61026 200 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 TYSND1Q2T9J0 566 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 ASTLQ6HA08 431 aaPredicted RBP15.37■□□□□ 0.05
COPS3-201ENST00000268717 C22orf39Q6P5X5 142 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 SPATA21Q7Z572 469 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 TTC30BQ8N4P2 665 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 MDGA1Q8NFP4 955 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 OR4L1Q8NH43 312 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 WFIKKN2Q8TEU8 576 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 PIH1D2Q8WWB5 315 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 TSPAN17Q96FV3 270 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 ATXN7L3BQ96GX2 97 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 CDKN2AIPNLQ96HQ2 116 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 TBATAQ96M53 351 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 ASB16Q96NS5 453 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 TCF12Q99081 682 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 ELAC2Q9BQ52 826 aaKnown RBP15.37■□□□□ 0.05
COPS3-201ENST00000268717 RPP25Q9BUL9 199 aaKnown RBP15.37■□□□□ 0.05
COPS3-201ENST00000268717 CPEB1Q9BZB8 566 aaKnown RBP15.37■□□□□ 0.05
COPS3-201ENST00000268717 TM6SF2Q9BZW4 377 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 C12orf65Q9H3J6 166 aaKnown RBP15.37■□□□□ 0.05
COPS3-201ENST00000268717 INTS10Q9NVR2 710 aaKnown RBP15.37■□□□□ 0.05
COPS3-201ENST00000268717 KCTD3Q9Y597 815 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 WNT6Q9Y6F9 365 aa15.37■□□□□ 0.05
COPS3-201ENST00000268717 NUP210Q8TEM1 1887 aaPredicted RBP15.37■□□□□ 0.05
COPS3-201ENST00000268717 A0A087X1B8 175 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 TGDSO95455 350 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 GOT2P00505 430 aaKnown RBP15.36■□□□□ 0.05
COPS3-201ENST00000268717 PRKCGP05129 697 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 COL9A1P20849 921 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 EPHB1P54762 984 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 HNRNPH2P55795 449 aaKnown RBP15.36■□□□□ 0.05
COPS3-201ENST00000268717 ECT2LQ008S8 904 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 DHCR24Q15392 516 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 EML3Q32P44 896 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 DGKKQ5KSL6 1271 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 PTAR1Q7Z6K3 402 aaPredicted RBP15.36■□□□□ 0.05
COPS3-201ENST00000268717 SDCCAG8Q86SQ7 713 aaPredicted RBP15.36■□□□□ 0.05
COPS3-201ENST00000268717 ADIPOR2Q86V24 386 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 NUDCD3Q8IVD9 361 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 OR13C4Q8NGS5 318 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 RDH11Q8TC12 318 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 ZNF398Q8TD17 642 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 PBXIP1Q96AQ6 731 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 TSNARE1Q96NA8 513 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 CATSPERZQ9NTU4 200 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 DUS2Q9NX74 493 aaKnown RBP15.36■□□□□ 0.05
COPS3-201ENST00000268717 VPS9D1Q9Y2B5 631 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 SLC27A6Q9Y2P4 619 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 PCDHB9Q9Y5E1 797 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 KMT2EQ8IZD2 1858 aa15.36■□□□□ 0.05
COPS3-201ENST00000268717 CCDC162PA2VCL2 907 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 WASH3PC4AMC7 463 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 CD3EAPO15446 510 aaKnown RBP15.35■□□□□ 0.05
COPS3-201ENST00000268717 HAUS5O94927 633 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 NFATC1O95644 943 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 S1PR4O95977 384 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 ASLP04424 464 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 CYP17A1P05093 508 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 SLC35E2BP0CK96 405 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 ADH5P11766 374 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 SRFP11831 508 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 HMGCLP35914 325 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 SLC26A3P40879 764 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 KPNA2P52292 529 aaKnown RBP15.35■□□□□ 0.05
COPS3-201ENST00000268717 TSNAXIP1Q2TAA8 658 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 PPM1JQ5JR12 505 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 CGB2Q6NT52 195 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 OR4K2Q8NGD2 314 aa15.35■□□□□ 0.05
COPS3-201ENST00000268717 BPIFB1Q8TDL5 484 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms