RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 STX7O15400 261 aaKnown RBP16.37■□□□□ 0.21
TPM1-201ENST00000267996 TBX10O75333 385 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 PROCP04070 461 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 ATP5BP06576 529 aaKnown RBP16.37■□□□□ 0.21
TPM1-201ENST00000267996 BPGMP07738 259 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 ALPIP09923 528 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 SLC35E2BP0CK96 405 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 COL6A2P12110 1019 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 BMP1P13497 986 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 CTPS1P17812 591 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 TAS2R39P59534 338 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 RAB10P61026 200 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 RAD51Q06609 339 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 PTPRNQ16849 979 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 CES5AQ6NT32 575 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 C16orf46Q6P387 395 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 FOXR1Q6PIV2 292 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 LYSMD3Q7Z3D4 306 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 LDB1Q86U70 411 aaPredicted RBP16.37■□□□□ 0.21
TPM1-201ENST00000267996 OTUD6BQ8N6M0 293 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 SORCS1Q8WY21 1168 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 TCF12Q99081 682 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 MANSC1Q9H8J5 431 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 TMEM216Q9P0N5 145 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 BPTFQ12830 3046 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 STMN1P16949 149 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 HNF1BP35680 557 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 GMPRP36959 345 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 SLC6A11P48066 632 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 STC1P52823 247 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 DLX2Q07687 328 aaPredicted RBP16.37■□□□□ 0.21
TPM1-201ENST00000267996 RBM20Q5T481 1227 aaKnown RBP16.37■□□□□ 0.21
TPM1-201ENST00000267996 GKAP1Q5VSY0 366 aaPredicted RBP16.37■□□□□ 0.21
TPM1-201ENST00000267996 SDCCAG8Q86SQ7 713 aaPredicted RBP16.37■□□□□ 0.21
TPM1-201ENST00000267996 CEP97Q8IW35 865 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 PNPLA1Q8N8W4 532 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 CHST14Q8NCH0 376 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 SEC16BQ96JE7 1060 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 ELMO2Q96JJ3 720 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 MCCC1Q96RQ3 725 aaPredicted RBP16.37■□□□□ 0.21
TPM1-201ENST00000267996 GPR63Q9BZJ6 419 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 PLA2G2FQ9BZM2 168 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 INTS10Q9NVR2 710 aaKnown RBP16.37■□□□□ 0.21
TPM1-201ENST00000267996 ELOVL2Q9NXB9 296 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 DEC1Q9P2X7 70 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 FKBPLQ9UIM3 349 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 TLK1Q9UKI8 766 aa16.37■□□□□ 0.21
TPM1-201ENST00000267996 TTC34A8MYJ7 566 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 PHGDHO43175 533 aaKnown RBP16.36■□□□□ 0.21
TPM1-201ENST00000267996 SNX3O60493 162 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 EDF1O60869 148 aaKnown RBP16.36■□□□□ 0.21
TPM1-201ENST00000267996 WISP3O95389 354 aaPredicted RBP16.36■□□□□ 0.21
TPM1-201ENST00000267996 NNMTP40261 264 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 XIAPP98170 497 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 IRF9Q00978 393 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 MESP2Q0VG99 397 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 PEX6Q13608 980 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 COL19A1Q14993 1142 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 CCDC153Q494R4 210 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 FASTKD1Q53R41 847 aaKnown RBP16.36■□□□□ 0.21
TPM1-201ENST00000267996 TAF1BQ53T94 588 aaPredicted RBP16.36■□□□□ 0.21
TPM1-201ENST00000267996 GRAMD4Q6IC98 578 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 TRIM42Q8IWZ5 723 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 PHTF2Q8N3S3 785 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 GPATCH11Q8N954 259 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 RAB3IL1Q8TBN0 382 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 ELSPBP1Q96BH3 223 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 GRAMD1AQ96CP6 724 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 SCRN2Q96FV2 425 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 RIPOR3Q96MK2 946 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 PITPNM3Q9BZ71 974 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 CIPCQ9C0C6 399 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 SLCO1B3Q9NPD5 702 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 ZNF358Q9NW07 568 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 COL4A3Q01955 1670 aa16.36■□□□□ 0.21
TPM1-201ENST00000267996 DENND4AQ7Z401 1863 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 IL1BP01584 269 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 LAMP2P13473 410 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 RECQLP46063 649 aaPredicted RBP16.35■□□□□ 0.21
TPM1-201ENST00000267996 HECTD2Q5U5R9 776 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 CGB2Q6NT52 195 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 ZNF549Q6P9A3 640 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 GDPD4Q6W3E5 623 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 RAPH1Q70E73 1250 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 CENPLQ8N0S6 344 aaPredicted RBP16.35■□□□□ 0.21
TPM1-201ENST00000267996 CPA6Q8N4T0 437 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 KDM1BQ8NB78 822 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 ST13P5Q8NFI4 369 aaPredicted RBP16.35■□□□□ 0.21
TPM1-201ENST00000267996 TSPAN17Q96FV3 270 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 OLFM1Q99784 485 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 ELAC2Q9BQ52 826 aaKnown RBP16.35■□□□□ 0.21
TPM1-201ENST00000267996 HEPHQ9BQS7 1158 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 ZDHHC6Q9H6R6 413 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 ZFYVE1Q9HBF4 777 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 SLC8A2Q9UPR5 921 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 ACOT9Q9Y305 439 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 VWA7Q9Y334 891 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 STARD13Q9Y3M8 1113 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 PKP3Q9Y446 797 aa16.35■□□□□ 0.21
TPM1-201ENST00000267996 WASF2Q9Y6W5 498 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms